Cinclus cinclus (white-throated dipper): 134046533
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Entry
134046533 CDS
T10813
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1 isoform X1
KO
K16682
LIM domain-containing protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134046533 (LIMD1)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134046533 (LIMD1)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134046533 (LIMD1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
134046533 (LIMD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
134046533
NCBI-ProteinID:
XP_062353077
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All DBs
Position
1:45208362..45236602
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AA seq
591 aa
AA seq
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MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKAAGNNPEFEETRRVFATKMAKIHLQQQ
QQQEEMLMAAMNGGAAAFQPPRPNPPLVRDSKPPPGAEGPRARPCEGGERCFGESSARAE
APGSQAGRRDWEAEPDRITRVGGSQPGTGRGEQQAGSPSDPQPCHGRQVNGGKGRRGVGG
HDPMATGQKSSFFSNAGTPLAPSVGPEEPLPQQESSSFTAPSAQPTRGFSGSAEPCSPKG
RGDGNQLWYQDVSLSFPPGSTSVAPSVEHQHAPAYRSPAGHFVAHGQNHRPASSSGNPEP
GSSRLASQGIVASNAPQMLFREAVSGPQSDSGHLDGSSTAKVKLPCQTLLPQPEQGPSAA
ELKLEALTQRLEQEMDARPKADYFGTCVKCSKGVYGANQACQAMGSLYHDSCFTCGACSR
KLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVI
CNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHV
ECYHCEDCGMELNDEDGHRCYPLDEHLLCHSCHLKHIENGTTPAAAYQHHY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtacgacgatctgggtctggaagccagcaagttcatcgaggatctcaacatg
tacgaggcctccaaggacggtctctttcgggtggataaagctgccggcaacaatcccgag
ttcgaggagaccaggagggtgttcgccaccaagatggccaagatccacctccagcagcag
cagcagcaggaggagatgctgatggccgcgatgaacggaggggctgccgccttccagccc
cctcgtcccaacccgccgctggtgcgggattcgaagccgccccccggcgccgaggggccg
cgagcgaggccctgtgagggaggggagcggtgcttcggagagagcagcgcacgtgccgag
gccccaggcagccaggccgggcgccgggactgggaagcagagcccgacaggatcacccga
gtgggaggctcacagcctggcacgggacgcggggagcaacaggctgggagccccagcgac
ccccagccctgccacggcaggcaggtgaacggcggcaagggcaggcgaggtgtcgggggc
catgacccgatggcaaccggacagaaatcctccttcttttcaaacgctgggacccccttg
gcaccttcagtgggtccagaggagcccctgccacagcaggagtcctcatccttcacagca
ccctccgctcagcccactcgagggttctcaggctctgctgagccctgcagtcccaaaggc
agaggagatggcaaccagctgtggtaccaggatgtctcattgtccttcccaccaggctcc
acatctgttgctcccagtgtggaacaccagcatgctcctgcctaccgcagcccagctggt
cactttgtggcccacggtcagaaccacaggcctgccagcagcagcgggaaccctgagcca
ggttcctcgcgcctggcctcgcaagggatagtggcttccaatgcacctcagatgcttttc
cgagaggctgtgagcgggccacagtcagactctgggcacctggatggctccagcacagca
aaggtgaagctgccctgccagaccctccttccacagccagagcaagggccatcggcagct
gagctgaagctggaggcattgacccagcgcttggagcaggagatggatgctcggccaaag
gccgattactttggtacctgcgtgaagtgcagcaagggcgtgtatggagcaaaccaggct
tgccaggccatgggtagcctctaccatgacagctgtttcacctgtggagcctgcagtcga
aagttgagaggaaaagccttttattttgtcaatggaaaggtgttttgtgaagaagacttc
ctgtattctggtttccagcagtctgctgacaggtgtttcatttgtggtcatttgataatg
gacatgatcctgcaggctctagggaaatcatatcatccaggctgcttccgatgtgtcatc
tgcaacgagtgtctggatggtgtgccattcactgtagactctgagaacaaaatctactgt
gtcagagattaccacaaagttttagctccaaagtgtgcagcgtgtggacttcccattctg
ccctctgaggggtctgatgagaccattcgggttgtgtcaatggacaaggattaccatgtg
gaatgttatcattgcgaggactgtgggatggaactgaatgacgaagatggacatcgctgt
tacccactggatgaacatttgctttgtcactcctgtcacctgaaacacatagagaatggc
acaaccccagcagctgcctaccagcaccactactag
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