Cinclus cinclus (white-throated dipper): 134046625
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Entry
134046625 CDS
T10813
Symbol
LMX1A
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134046625 (LMX1A)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
134046625 (LMX1A)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134046625
NCBI-ProteinID:
XP_062353262
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Position
8:1979515..2020612
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AA seq
381 aa
AA seq
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MLDGLKMEESLQSALDPATPFSSLLGRAATPKSVCEGCQRVILDRFLLRLNDSLWHEQCV
QCASCKEPLQTTCFYRDKKLYCKLDYEKLFAVKCAGCLEAIAPSELVMRAQKSVYHLHCF
CCCVCERRLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPALSDSGKSDDEDSICKLGQA
SGKGTEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV
WFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGSAGLEGMLNPYTTLPPPQQLLG
MEQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLGTTDAGQL
QARVGNPIDHLYSMQNSYFTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgggctgaagatggaggagagtttgcagagcgccctggaccccgcgacccct
ttctcctccttgctgggcagagccgcgacccccaagtcggtgtgcgaagggtgtcagcga
gtgattttggaccggttcttgctgcgcctgaacgacagcctttggcacgagcagtgcgtc
cagtgcgcatcctgcaaggagcccttgcagaccacctgcttctaccgagacaagaagctc
tactgcaagctggactatgagaagctgtttgcagtgaaatgcgcgggctgcctggaggcc
atcgcgcccagcgagctggtgatgcgcgcccagaagagcgtctaccacctgcactgcttc
tgctgctgcgtctgcgagcggcgcctgcagaagggcgacgagttcgtgctcaaggaggga
cagctcctctgtaagggcgactacgagaaggagcgggagctgctgagcttggtgagcccg
gctctgtcggattctggcaaaagtgatgatgaggacagcatctgcaagttgggccaggcc
tcagggaagggcactgaggatgggaaggatcacaaacgacccaagaggccacggaccatc
ctgaccacgcagcagcggagggcgttcaaggcatcgtttgaggtctcctccaagccctgc
aggaaggtgcgggagacgctggcagcagagactgggctgagtgtccgtgtggtgcaggtc
tggttccagaaccagcgagcaaagatgaagaagctcgccaggaggcagcagcagcagcag
caggaccagcagaacacacagcgcctgagctcagcccagacgaacggcgggggcagcgca
gggctggaagggatgctgaacccttacaccaccctgcccccgccccagcagctgctgggc
atggagcaaagtgtctacagctccgacccattccggcaagggctcaccccgccccagatg
cccggagatcacatgcacccctatggtgccgagcccctcttccatgacctggacagcgac
gatacctcactgagcaatctgggggactgcttccttggcacaacagacgcagggcagctc
caggcacgagtgggaaaccccattgaccacctctactccatgcagaactcctacttcacc
tcctga
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