Cinclus cinclus (white-throated dipper): 134046717
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Entry
134046717 CDS
T10813
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04115
p53 signaling pathway
ccic04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134046717 (COP1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134046717 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134046717 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134046717
NCBI-ProteinID:
XP_062353407
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Position
8:4150476..4275128
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AA seq
702 aa
AA seq
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MSGSRPPHPAVPPAATPASSSSSSSSSSSAAMAPGSSSSGGAAARPVLVAAAVSGSGAGL
ARLAAGAARPGGSSAAPGGGGRKRPLLTPLCNGLINSYEDKSNDFVCPICFDMIEEAYMT
KCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSEEKRLKLDH
SVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLK
VARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDST
EYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRTTSQL
DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYE
YGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVY
QEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRY
HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGK
PHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDK
DRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagccgcccgccgcaccccgccgtgccgcccgccgccactccggcctcttct
tcctcatcctcctcctcctcctcctcggcggccatggcccccggctcgtcctcctcgggc
ggcgcggcggcgcggcccgtgctggtggcggcggccgtgtcggggtcgggtgcggggctg
gcccggctggcggcgggggcggcgcggcccggcggctcctccgcggcgccggggggcggt
ggcaggaagaggccgctgctcactccgctctgcaacgggctcattaactcctacgaggac
aagagcaacgacttcgtgtgccccatctgttttgacatgattgaagaagcgtacatgacg
aaatgtggacacagcttctgctataaatgtattcaccagagcctggaagacaataacaga
tgtcccaaatgcaactatgttgtggacaacatagatcatctttatcccaacttcttagtt
aatgaattaattcttaaacagaagcaaagatctgaggagaaaagactcaaactggaccat
tcagtgagtagcaccaatggccacaggtggcagataattcaagatttgttgggaactgat
caagacaatcttgacttagccaatgtcaaccttatgctggagctactggtgcaaaagaag
aagcagctggaagcagaatctcatgctgcccaattgcagatacttatggaatttcttaaa
gtcgccaggagaaacaaaagagagcaattggagcagatccagaaggagctaagtgttctg
gaagaagatattaaacgagtagaggagatgagtggcctgtactccccagtcagtgaggac
agcacagtgcctcagtttgaggctccttcaccttcacacagtagtattattgactccacc
gagtatagccagcctccaggcttcagtggcagttctcagaccaaaaagcagccatggtat
aacagcacgctcgcctcgcgacgcaagcgcctcacagctcattttgaggacctagagcaa
tgctatttttctaccaggatgactcgtgtctcagatgacagcagaaccaccagccagctg
gatgagtttcaggagtgtctatccaagttcacgcgctacaattctgtccgaccgctggca
acgctgtcttacgctagtgacctctacaatggttccagcattgtatccagtattgagttc
gacagagactgtgactacttcgccattgctggagtgacaaagaagattaaagtgtatgag
tatggtacagtcattcaggatgcagtggatattcactaccctgagaatgaaatgacctgt
aattccaaaatcagctgtatcagctggagtagttaccacaagaacctgctagccagcagt
gactacgaaggcaccgtcatcctttgggatggattcacaggacagagatccaaggtctac
caggagcatgagaaaaggtgctggagtgtggactttaatttgatggaccctaagctattg
gcttcaggctctgatgatgccaaagtgaaactgtggtctaccaacttggacaactcagtt
gcaagcattgaggccaaggctaacgtgtgttgtgtcaaattcagcccatcttccaggtat
cacctagcttttggctgtgcagatcactgtgttcactactatgaccttcgcaacactaag
cagcccatcatggtattcaaagggcatcgcaaggcagtgtcctatgcaaaatttgtgagc
ggggaagaaatcgtctctgcgtcaacagacagtcagctgaagctgtggaatgtaggcaag
cctcactgcttgcgctccttcaagggtcacatcaacgagaagaacttcgtagggcttgca
tccaacggagactacattgcctgtggaagtgaaaataattccctttacttatactataag
ggtctctcaaagacactgctgacattcaagtttgatacagtcaaaagtgtcctggacaag
gaccggaaagaagatgacacgaatgagtttgtgagcgcagtgtgctggagggcacttcca
gatggggagtccaatgtgcttattgctgctaacagtcagggtacaattaaggtactggag
ctggtatga
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