Cinclus cinclus (white-throated dipper): 134046981
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Entry
134046981 CDS
T10813
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134046981 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134046981 (TPR)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134046981 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
134046981
NCBI-ProteinID:
XP_062353869
LinkDB
All DBs
Position
8:complement(5079882..5113417)
Genome browser
AA seq
2405 aa
AA seq
DB search
MTLCCRHTHDGGRRGRAGSGSAPGGGPCCAGAMAAVLQQLLERAELAKLPRAVQGKLERF
LGDQQGEIDGLRARHERFKVDSEQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQ
LKVLNEKNKELEAAQDRNAAVQSQLSREKEELEAEKRDLVRTTERRSQEVEHLNEDVKRL
NEKLAEANTEKAKLELKLDELQTSDVSMKYREKRLEQEKELLQNQNTWLNAELKAKTDEL
LHTAREKGNEILELKCSLENKKEEVSRMEEQVNSLKQSNENLQKHVEELLNKLKEAKEQQ
ASMEERFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKAAQEHL
AEVEESKAAMEKELREKISKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKV
VKPGMKLTELYNAYVETQDQLHMEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQ
KAVASLSAKLEQAMKEIHRLQDSADQANKHASFFERESQRLEVRVKDLSQQICVLLMELE
EARGNHVIRDEAVSSADISSSSEVITQHLVSYRNIQELQQQNQRLLVALRELGEAREKEE
QETTSSKISELQSQLDEAVSELQQLRESRQHQLQLVESIIRQRDLFRILLTQTTGAIIPL
QASGMLPEEICLTSTPKRPNLPQSMATPAPVSMSESVETVEAKAALKQLQEVFENYKKEK
AENDKLLNEQNEKLQEQVTDLRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERT
QKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRDSLL
VEQRGQNLLLTNLRTIQGILERSETETKQRLNNQIEKLEREVSQLKKKLENEVEQRHSLT
KNQEVHILDLKRQLETETSRHINTKELLKNAQKESAMLKQQLNNTEAQLTSQSSQRPPGK
GQPSTNEDVDDLVSRLRQAEEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEE
VRKTVEARLKESSEYQAQLEKKLMESEKEKQELQEEKRKAVENMEQQLSELKRSLSAVQS
EVQEALQRASTALNNEQQARRDCQEQAMMASEAQNKYERELMLHAADVEALQAIKEQVAK
NAAVRQQLEEAAQKAESELLESKASWEERERMIKDEASKLASRCEDLEKQNRLLHEQLES
MSNKMVTSMKEAIPAAANVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYR
QRVEHLERELQELQDSLNAEREKVQVTAKTIAQHEELMKKTETMNILIETNKMLREEKER
LEQELQQIQAKVRKLEADILPLQESNAELSEKSGMLQAEKKLLEEDVKRWKARTQHLLSQ
QKDTDLEEYRKLLSEKEANAKRVQQMSEETGRLKAEVARTNASLTASQNLVQSLKDEVTK
IRTEKDNLQKELDAKMADIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEASTLPLA
EPQEDQVSAQEVQELKDTLSQAEVKTKNLETQVESLQKTITEKETEVRNLQEQIMQLQAE
LARFHQDLQEKTTQEEQLRQQITEKEEKTRKTLLAAKQKIAQLAGTKEQLTKENEEWKQK
SSSLEEQKAELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPPESTNKVPEQQRQ
ISLKSTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPA
TVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPVFGSASGSVRSTSPNVQTSLPQPIL
TVQQQTQATAFVQPTQQSHAQIEPAAQEPAPAIVEVVQSSQIERPSTSTAVFGTVSATPS
SSLSKRSREEEEDNTVENSDQISEETVDAPTSKKLRIMQRVGPEEEVTAEESTDGEVEAQ
TYNQDSQDSIGEGVTQGEYVAMEDSEETSQSIPIDLGSLQSDQQNTSSSQDGQSKRDDVI
VIDSDDEDDDDEENEGEQEDYDDEEEEDEDDDEDTGMGDEGDDSNEGTGSADGNDGYEAD
DAEGADGTDPGTETEESMGGAESNQRAADSQNSGEGSTSAAESTFPHESLREQQPSSASE
RQGPRPPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMSL
FFQQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSH
SDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESASADALEHASQ
SVPMVTTSTGSLSTTTEPGAGDDADEVFAEAESEGITSEAGLEIDSQQEEESVQASDESD
LPSTSQDPPSSSSADTSSTQPKSLRRVRLQPPTLRTGVRGRQFNRQRGITHAMGGRGGLN
RGNIS
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtgctgccgccacacccatgatggcggacggcgtggccgtgccggaagcgga
agcgcgcccggcggcgggccgtgctgtgccggagcgatggcggctgtgctgcagcagctc
ctggagcgggccgagctcgctaagctgccccgtgctgtacagggcaagctggaacgcttc
ctgggcgaccagcagggcgagatcgatgggctgcgggcccgtcatgagcgcttcaaggtg
gacagcgaacaacaatactttgaagtggaaaagcgactggctcagagtcaggaaagactt
gtaaatgagacccaggaatgtcaaactctacgggaggagcttaaaaagcttcatgagcag
ctgaaggtgctcaatgagaagaacaaggagcttgaggctgcccaggaccggaatgcggcc
gttcagagccagttaagtcgagagaaggaagaactggaagctgagaagagagacttggtc
cgaacaactgaaaggcgatctcaggaagttgaacatttaaatgaggatgttaaacgctta
aatgaaaagcttgcagaggcaaacacagaaaaggcaaaacttgagctgaagttggatgag
cttcaaacatcggatgtttccatgaagtaccgagagaaaaggctggagcaagaaaaagag
ctgctgcagaaccagaacacatggctgaatgctgagctgaaagccaaaacagatgaactg
ctccatactgctagggagaaaggcaatgaaatcctggagctcaaatgcagtctggagaac
aaaaaggaggaggtttccagaatggaggaacaggtgaacagcttgaaacagtcaaatgaa
aacctccagaaacatgttgaagaacttttgaataaactgaaggaggcaaaagagcagcag
gcaagcatggaagagagattccacaatgaactgaatgcccacattaaattatccaacttg
tataagagtgctgctgatgactcagaggcaaagagcaatgagctgacaggagcagtggaa
gagctgcacaagctcctcaaggaagcaggtgaagctaataaagcagcccaggagcatttg
gctgaggtggaggagtcaaaagctgccatggagaaggagctgagagagaagatcagtaag
ctggaaaaggagctggagaatgccaacgatttactgtcagctacgaagcgcaaaggagca
atcctgtccgaggaggagctggcagccatgtctcccactgctgcagcagtggccaaagtg
gtcaagcctggaatgaagttaactgaactgtacaatgcctatgtagaaactcaggatcag
ttgcatatggagaagctggagaataagagaatcaataaatatttggatgaaatagttcag
gaagtagaagccaaagccccaatcttaaaacgtcagcgtgaagaatttgagcgttcccaa
aaagctgttgcaagtctgtccgcaaagcttgaacaagccatgaaggagatccatcgcctg
caggacagcgccgaccaagccaacaaacatgcctccttctttgagagggagagccagaga
ctggaagtgcgagtgaaggatctctcccagcagatctgtgtgttgttaatggaactggaa
gaagccagaggcaaccacgtgatccgtgatgaagcagtgagctctgctgacatcagcagc
tcttctgaagtgatcactcaacacctggtttcctacagaaatatccaagagcttcagcag
cagaatcagcgtctcctcgtggctcttcgggagctgggggaggcaagagaaaaagaggag
caagaaacaacatcatctaagatctctgagctccagagccagctggatgaggctgtcagt
gagctgcagcagctgcgggagtcacggcagcaccagctgcagctcgtggagtccatcatc
cgccaacgggacttgttccgcatcctgctcacccagaccacgggggccatcattcctcta
caagcttcaggtatgttaccagaggagatctgtcttacatctactccaaagcgtccaaat
ttacctcagtccatggcaactcctgctccagtgtccatgagtgagtctgtggagactgtg
gaggctaaggctgctcttaagcagttgcaggaagtttttgagaactataaaaaagagaag
gcagagaatgacaaacttctgaatgaacagaatgaaaagcttcaggagcaggtcacagac
ttgaggtcacaaaatgccaagatatccacacagctggaatttgcctccaaacggtacgag
atgttgcaggataacgtggaaggctatcgccgggaaatcacctccctgcatgagagaacc
cagaaactcacagcaaccactcagaagcaggagcagatcattaacaccatgactcaggac
ctgaggggagctaatgaaaaactggcagtggcagaggtgagagcagaaaatttgaagaag
gagaaggatatcttgaagatgtcagatgtgcgcctgactcagcagcgtgactctctgctg
gttgaacaaagaggacagaacttgctgctcaccaatttgagaacaattcaggggatactc
gagagatctgagacagaaacaaagcagagactcaataatcagatagaaaagctggagcgt
gaggtatctcagctgaagaagaaactggaaaatgaggtggaacaaagacattcccttacc
aagaatcaagaggtgcatatcctggacctaaagaggcagctggagacggagaccagccgt
cacatcaacacaaaggaactcctgaagaacgcccagaaggaaagtgccatgttgaaacag
cagctgaacaacactgaggcccagctcacgtcccagtcctcacaaaggcctccagggaaa
ggtcagccaagtacaaatgaagatgtggatgatcttgtaagtcggctgagacaagctgag
gaacaagtcaatgacctgagagagaggctcaagactagttccagtaatgtggagcaatac
agggccatggttcttagcctggaggagtccctcaataaggaaaaacaagtgacagaggaa
gttcgtaaaacagttgaagctcgtctgaaggagtcttcagaataccaggcacagctggag
aagaaactgatggagtcagaaaaagaaaaacaagaactgcaggaggagaagcgtaaagct
gtggagaacatggagcaacagctttcagaactgaagagaagtctgtcagctgtgcagtca
gaagttcaggaagctcttcagagagccagcacagctctgaataatgaacaacaggccagg
agggactgccaggaacaagcaatgatggcttctgaagctcagaacaaatatgagcgggaa
ttgatgcttcatgctgctgatgtggaggcactacaggccatcaaagaacaagtcgccaag
aacgcagcggtgaggcagcagctggaggaggctgctcagaaagcagagtctgagctctta
gaatccaaagcctcctgggaagagagagagagaatgatcaaggatgaagcttcaaaactt
gcatcccgctgtgaggatctggaaaaacaaaatcgattgttacatgagcagctggagagc
atgagcaataagatggtgacttccatgaaagaagccatcccagctgcagcaaatgtttct
cttagtgaggaaggcaaatcccaggaacaaatcttggaaattcttaggtttatccgtcgg
gagaaggagattgcagagacgaggttcgaggtggcgcaggtggagagcctgcggtaccgc
cagagagtggagcacttggagagggagctccaggagctgcaggacagcctcaatgctgag
agggagaaggtgcaggtaacagcaaaaactattgcacagcatgaagaattaatgaagaaa
actgagaccatgaacatactcatagaaaccaacaagatgttaagggaggagaaggagagg
ctggagcaagagctacagcagatacaagcaaaggtacgcaagcttgaggcagacatcctg
cccctgcaagagtcgaatgctgagctcagtgagaagagtgggatgctgcaggcagagaaa
aagctcttggaagaggatgttaaacgctggaaagcccgcactcagcacttactgagccaa
cagaaggacaccgatctcgaagagtatcgaaagctgctctctgagaaggaggcaaatgcc
aagcgtgtccaacagatgagtgaagaaacaggcaggcttaaagcagaggttgccagaact
aatgcatccttgactgcaagccagaatcttgttcagagcctgaaggatgaagtaactaaa
ataagaacagaaaaggacaatttgcagaaagaactggatgctaagatggctgacatacag
gaaaaagtgaaaactataacacaggtcaagaaaattggtcggaggtacaagactcagtat
gaggagctgaaagcacagcatgataagatggttgctgaagcatcaactctacctttggca
gaaccacaagaagaccaagtttctgcccaggaagtacaagagctaaaagacactctcagt
caagctgaagtaaaaacaaagaatttggagactcaggttgaaagcttacaaaagacaata
acagaaaaggaaactgaagttagaaatctccaggagcagataatgcagctacaggcagaa
ctggcccgtttccatcaagatctacaagagaagactacacaggaagagcagctcaggcaa
cagatcacagagaaggaagagaaaaccaggaagaccttacttgcagccaaacagaaaatt
gcacagttagctggtacaaaagagcagctcacaaaggaaaatgaggagtggaagcagaag
agcagctccctggaggagcagaaggcagagctggaggtgcggatgagtgccctgaagtcc
cagtacgaggggcggatctgccgcctggagagggagctccgggagcagcaggagcggcac
cacgagcagcgggatgagcccccggagtccacaaacaaggtcccagaacagcagaggcaa
atctcactcaagtctactccagcttcaggtgaaagaggaattgccagcacttcagatccc
ccaacagcaaacattaaaccaactcctgttgtgtcaactcccagtaaagtgactgctgct
gcaatagctgggaacaagtctactccaagagccagcatccgtccaatggtgactcctgcc
acagtcaccaaccccaccactacccccacagccacagttatgccaacgacacaggtggag
actcaggaagccatgcagtcggaaggacccgtggagcacgtcccagtgtttgggagcgcc
agtggctccgtgcgctccaccagccccaacgtgcagacatctctgccccagcccatcctg
actgtgcagcagcagacacaggccactgcctttgtgcagcccacccaacaaagccacgct
cagatcgagcctgcagctcaggagccagcccctgccatcgtggaggtggtgcagagctcc
cagatagagaggccctccacctccacagccgtgtttggcacagtttcagctacccccagt
tcctcattgtctaaacgctcccgagaggaagaggaagacaacactgtggagaactcagac
cagatctctgaggaaacagtggatgcacctacttcaaagaaactgagaatcatgcagaga
gttgggcctgaggaggaagtgacagcagaagagagcactgatggagaggtggaggcacaa
acatacaatcaagactcacaagactccattggagaaggtgtgacacagggggagtatgtg
gccatggaggacagcgaggaaacttcccagtctatcccaatagatctcggatcccttcag
tcagaccaacaaaatacttcttcatctcaggatggccagtccaagagagatgatgtgatt
gtaattgatagtgatgatgaagatgacgatgatgaagaaaatgaaggggagcaggaggat
tatgatgatgaggaagaggaggatgaggatgatgatgaagacacagggatgggagatgaa
ggtgatgacagcaatgaaggaactggtagtgctgatggcaatgatggatatgaagcagat
gatgctgagggtgctgatggtacagatcctggaacagagactgaagagagcatgggagga
gctgaaagcaaccagagggcagcagattcccaaaacagtggagaagggagcacgagtgct
gcagagtccacgtttccccacgagagcctgagggagcagcagccatcgtcggcgtcggag
cgccagggcccgcggcccccgcagtccccacggaggccaccccaccctctgcccccacgg
cttaccatccacgcccctcctcaggagctgggacccccagtgcagagaatccagatgact
cgaagacaatcggtggggcgaggacttcagctgacccctgggataggtggaatgtctctt
tttttccagcagcagcacttctttgatgatgaagacagaacagttccaagcacaccaaca
cttgtagttccacatcgtacagatggatttgcagaagccattcattccccccaggtagct
ggagttcctcggttcagatttgggccccctgaagatatgccacaaaccagctccagtcac
tctgatcttgggcagctggcatcacaaggaggtttagggatgtacgaaaccccactgttc
cttgcccacgaggaggaatcggggggtcgcagtgtccccacaacaccgttacaagtggca
gcaccggtgacagtgttcacagagagcgcctcagctgatgccttggagcacgcgtcccag
tccgtgcccatggtcaccacctccactggcagcctgtccaccaccaccgagcctggcgct
ggcgacgacgccgatgaggtcttcgcagaggcagagtctgaaggcattacttcagaagca
ggtctagaaattgatagccagcaggaagaagaatctgttcaagcatctgatgagtcagat
cttccttcaactagtcaggatcctccttcgagttcatctgcagacacaagcagcactcag
cccaagtccctgcgccgtgtccggctgcagcccccgacactgaggacgggcgtgcgtggc
cggcagttcaacaggcagaggggtataactcatgccatgggaggcagaggaggcctgaac
agaggaaacattagttaa
DBGET
integrated database retrieval system
