Cinclus cinclus (white-throated dipper): 134047014
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Entry
134047014 CDS
T10813
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
134047014 (RAD54L)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
134047014
NCBI-ProteinID:
XP_062353922
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Position
8:22199594..22217170
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AA seq
821 aa
AA seq
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MAAFTSLPAPKLLKSQRERIPFSVFPPRSPDRVDAARCRSALSRSGLRPRGGAGPGAFPA
PAARAAAVTASARSREAMRRSLAPSQLAKRKAGDEDEEEEEDWQPPTSRKRQKAAGEAES
GECYRSPFRKPLAQLTNRPHCLDSSQHEAFIRSILSKPFKVPIPNYKGPLGLRSLGVKRA
GLRGPLHDPFEEGALVLYEPPVLSAHDQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVKF
LWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLV
RNWYNEVEKWLGGRIQPLAIDGGSKEDIDRKLVGFMNQRGLRVPSPILIISYETFRLHAE
VLQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVN
SGILGTAQEFKRHFEMPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKY
LPVKIEQVVCCRLTPLQTELYKNFLKQAKPVEELKEGKISVSSLSSITSLKKLCNHPALV
YDKCVEEEEGFMGALGLFPSGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYT
QTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLI
GANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSS
CVVDEEQDVERHFSLGELKELFTLNETTTSDTHDKIKCRRCVNGHQVRPPPVGSDCTSDL
SQWHHCADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQRGIP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcacctcactgccagcgcccaagctgctgaagagccaaagggaacgaatc
ccattctcggttttccccccgcggagccccgatcgggtcgatgcggcccgctgccgctcg
gcgctctctcggtctggcctgcggccccggggcggggccgggcccggcgcttttcccgcc
ccggcggcgcgcgcggcggccgttaccgcgtccgcgcgctcccgtgaggcgatgaggagg
agcctcgcccccagccagctggccaagaggaaggcgggcgatgaagatgaggaagaggag
gaggactggcagcccccgacgagccggaagaggcagaaggcagcgggtgaggcggagagt
ggagaatgctacaggtcacctttccgcaaacccttggctcagctgaccaacagaccccac
tgcctggacagcagtcagcacgaggcttttatccgcagtattttgtccaaacccttcaaa
gtccccattccaaattataaagggcccctgggcttgcgctcgctgggtgtcaaacgagca
ggactgaggggtcctctccatgacccgtttgaggaaggagctctggttctgtacgagccc
ccggtgctgagtgctcatgaccagctgaaaatagacaaggacaaggtacctgtccatgtt
gtggtggatcctgtcctcagtcgtgttttacgaccccatcagagagaaggggtgaaattc
ctctgggactgtgtgacgagccggcggatccctgggagccatggctgtatcatggcagat
gaaatggggctgggcaaaactctccagtgcatcaccctcatgtggacgcttctccggcaa
agcccagactgcaagcctgaaatcgagaaagccgtggtggtgtctccctccagcctagtg
agaaactggtacaatgaagtagagaaatggctggggggaaggatccagccactggccatt
gatggaggctccaaggaagacattgaccgtaaactagttggctttatgaaccagcgtggc
ctgcgagtgccttcacccattctgattatctcctatgagaccttccgactgcatgctgag
gtgctgcagaagggcagtgttgggctggtcatatgtgatgagggccatagattgaagaac
tctgaaaaccaaacttatcaggctctcaacagcttaaacacacctcgacgagtccttatc
tcgggcacccctattcagaatgacctgctggagtatttcagcctggtacactttgtcaat
tcaggcattctgggaactgcacaggaatttaaaaggcattttgaaatgcccatcttgaaa
ggaagagatgcagatgcaagtgaagctgagcgacacaagggagaagagaggcttaaagag
ctgatcagtattgtgaacaggtgtttaattcggagaacttcagacatcttgtccaaatac
ctgccagtgaagattgaacaggtggtctgctgcagactgacacctctgcagactgagctg
tacaagaacttcctgaagcaagccaagccagtggaggagctgaaggagggcaaaatcagt
gtgtcatctctctcttccatcacatccttgaagaagctctgtaatcatcctgctcttgtt
tatgataagtgtgtggaagaggaagaaggatttatgggagccctgggcttgttcccttct
ggctacagcaccaaatctgtagaaccccagctgtcaggaaagatgctggttttggattac
atccttgctgttaccaaaagcaccagtaatgacaaggtggttttagtgtccaactacact
cagacactagatctatttgaaaagctctgcaggaacagaaggtatttgtatgtccggctg
gacggcaccatgtccattaaaaagagagcaaagatcgtggagcgattcaacagcccctcg
agccctgagttcatcttcatgttaagcagcaaagcaggtggctgtggtttgaacctgatt
ggggccaacagactggtgatgtttgaccccgactggaacccagccaacgatgagcaggcc
atggctcgtgtgtggcgtgacggccagaagaagacgtgctacatctaccgactgctctcg
acagggaccatagaggagaagatattccagcgccagacccacaagaaagccctgagcagc
tgcgtggtggatgaagagcaggatgtagaaaggcatttctcacttggggagctgaaggag
ctcttcacgttgaatgagaccaccaccagtgacacccatgacaagatcaagtgtcgccgc
tgtgtgaacgggcaccaggtgcggccccctcccgtcggctccgactgcacctcggacctg
tcccagtggcaccactgcgcggacaagcggggcctgcaggactctgtgctcaaggctgct
tgggacgctgctgtcaccttcactttccatcatcactcccacgaggagcagcgagggatt
ccctaa
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