Cinclus cinclus (white-throated dipper): 134047032
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Entry
134047032 CDS
T10813
Symbol
CTH
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00260
Glycine, serine and threonine metabolism
ccic00270
Cysteine and methionine metabolism
ccic00450
Selenocompound metabolism
ccic00670
One carbon pool by folate
ccic01100
Metabolic pathways
ccic01230
Biosynthesis of amino acids
Module
ccic_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134047032 (CTH)
00270 Cysteine and methionine metabolism
134047032 (CTH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
134047032 (CTH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134047032 (CTH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134047032 (CTH)
Enzymes [BR:
ccic01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
134047032 (CTH)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134047032 (CTH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
134047032
NCBI-ProteinID:
XP_062353940
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All DBs
Position
8:complement(29985722..29997325)
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AA seq
481 aa
AA seq
DB search
MADKGTLGFLPPFKHFATSAIHAGQEPEQWRSGAVVPPISLSTTFKQRAPGEHAGYEYSR
SGNPTRECLEKAAAALDGAKYCLAYSSGLAALLNICHLLKTGDTVICMDDVYGGTNRYFQ
KVASEINLKVIFVDCTKPKCLEAAITPETKLVWLETPTNPTLKVIDIKACSDVVSRHQGV
LLAVDNSFMSAYFQRPLSLGADICMSSATKYMNGHSDVLMGLVSVNRDDLYERLKFLQNS
LGAVPSPFDCFLCNRGLKTLHLRMKLHFHNGLAVAKFLESHPRVEKVIYPGLPSHPQYQV
MQKQCTGCPGMITFYIKGNLKNASAFLKNLKVFALAESLGGYESLAEHPAIMTHASVPEE
ERQALGITDTLIRLSVGLEDEEDLLADLEQALKASPCSGTAPVDSGEVEMCQAQLPWILE
SCSGRDSNSPPAESPSPARRVTSRALAPVSANQRPPADSNGGAAAAVGRAAGPAGGAALS
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggggacgctggggtttctgcctcccttcaagcacttcgctaccagcgcc
attcatgccggccaggagcccgagcagtggcgctccggggccgtggtgccgcccatctcg
ctctccaccaccttcaagcagcgggcgcccggcgagcacgcgggttatgaatactcccgg
tctgggaaccccactcgggagtgcctggaaaaggctgcagctgccctcgatggagccaaa
tactgcttggcttattcctctggcttagcagctcttttgaacatctgtcacctgctgaag
acaggggacacagttatctgcatggatgatgtctatggaggcacaaacagatatttccag
aaagtagcctcagaaattaatttgaaagtaatttttgttgactgcacaaaaccaaaatgc
ctggaagctgcaattacaccagagaccaagctggtttggctggagacccccacgaacccc
acgctgaaggtgatcgacatcaaagcctgctcagatgtggtgagcagacaccaaggggtg
ctgctggcagtggacaacagcttcatgtctgcctacttccagcgtcctttgtccctgggg
gctgatatttgtatgtcttctgcaaccaaatacatgaatgggcacagtgatgttctcatg
ggcctggtctctgtaaaccgggatgatctatatgagaggctcaaattcttgcagaactcc
ctgggagctgttccctccccctttgactgcttcctctgcaaccgtgggctcaagactctg
cacctccggatgaagctgcacttccacaacggcctggctgtggccaagttcctggaatcc
catcccagggtggagaaggtcatttacccagggttgccttcccacccccagtatcaagtg
atgcagaagcagtgcacgggctgtcctggaatgatcaccttctacattaaagggaacctc
aaaaatgcctctgccttcctcaagaacttgaaggtgtttgccctggctgagagtctgggt
ggctacgagagcctggcagagcatccggccatcatgacccacgcctcagtgcctgaggag
gaaaggcaagctctgggaatcactgacaccttgatccgcctctcggtggggctggaggat
gaggaggatttgctggcagacctggagcaggccctgaaggcttcgccctgctcaggcaca
gctcccgtggattctggagaggttgagatgtgccaggcacagctcccgtggattctggag
agttgctcggggcgggattcgaactcgccgcctgcagagtcccccagcccggcccgccgc
gtgacgtcacgcgcgcttgcgcctgtctcggccaatcagcggccgccggcggattcgaac
ggcggggcggcggcggccgttgggcgtgcggcggggccggcagggggcgctgcgctctcc
ggctga
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