Cinclus cinclus (white-throated dipper): 134047118
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Entry
134047118 CDS
T10813
Symbol
GLI3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134047118 (GLI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134047118 (GLI3)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
134047118 (GLI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
Motif
Other DBs
NCBI-GeneID:
134047118
NCBI-ProteinID:
XP_062354038
LinkDB
All DBs
Position
1:52800026..52985091
Genome browser
AA seq
1575 aa
AA seq
DB search
MEAQSHSSSTTEKKKVENSIVKCSSRTDVSEKAVASSTTSNEDESPGQTYHRERRNAITM
QPQGGQGLGKISEEPSTSSEERASLIKKEIHGSISHLPEPSVPYRGTLFTMDPRNGYMDP
HYHPPHLFPAFHPPVPIDARHHEGRYHYEPSPIPPLHVPSALSSSPTYSELPFLRISPHR
NPAATSESPFSTPHPYINPYMDYIRSLHSSPSLSMISAARGLSPTDAPHAGVSPAEYYHQ
MALLAGQRSPYADIIPSAATAGAGALHMEYLHAMDSARFPSPRLSARPSRKRTLSISPLS
DHSFDLQTMIRTSPNSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYPPTPVSLQQM
HQQIISRQQTLGSAFGHSPPLIHPAPTFPTQRPIPGIPSVLNPVQVSSGPSESTQQNKPT
SESAVSSTGDPMHNKRSKIKPDEDLPSPGAGSMQEQPEGMTLVKEEGDKDESKQEPEVVY
ETNCHWEGCSREFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMR
RHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQN
RTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPRDPGS
HSQTRSPGHQTQGAIGEQKDLSNTTSKREECLQVKAVKSEKPMTSQPSPGGQSTCSSEQS
PISNYSNNGIELTLTGGGSVGDLSVIDETPIMDSTISTATTALGLQARRNMTGTKWMEQV
KLERLKQVNGMLPRLNPVPPSKAPTLLPLIGNGTQSNSSCSVGGSMTILPNRNELSSTDI
TVLNMLNRRDSNTSTISSAYLSSRRSSGISPCFSSRRSSDASQAEGRPQNVSVADSYDPI
STDASRRSSEASQCDDLPSLLSLTPAQQYRLKAKYAAATGGPPPTPLPNMERMSLKTRMA
LLGDCRESGVSPLPPVNVPRRCSDGGANGYSRRHFLSHEALGNGTRRASDPVRMASDNLS
VPRVQRFNSLNSFNPPALLPSMEKRSLVLQNYTRSEGGVFRGFSSPCPPSISENVTLEAA
TMEAGSSLNDEDLLPDDVVQYLNSQNQGMYDHLLNNVLDSNKMHHSSVSGNNNPSNFDQA
PAPSSQQAGPEANKSDLPIQWNEVSSGSSDLSPSKLKCGQRSAVQQARTFRLYNNMMVQQ
QNLERSNMSQQNGYQNLVENNASYSLQQNMTLGTGAGNSFSMQSNKPYSESMGRQAMMSG
VTDNSCGMAVQGQKLRISNMPVNGNQQNFSHPLASSDQTTSMADGMQDRNMMEQEYLQSQ
PVGDGVHYQGVSQSGQMMLGQVSPTSQGSLYQGLQSCPLASHTIGSQPSGLSVAKSYQSC
SNYSSNRRQNVLRNNLSQQQRHTSDGNQMYRVNTIKMEMQGQSQQFCSNMQNYSGQLYDQ
TMGFSHQAMKTGSFFGSEASCLLQGTATENSSELLSPGANQVSSTVDSIDNNSLESVQID
FDAIIDDGDHVSLISGALSPSIIQNVSRNSSRLTTPRPSLTFPGMPVSTTNMAIGDMSSL
LTSLAEESKFLAVMQ
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcagtcccatagttcttccacaactgagaagaaaaaagtggagaattcaatc
gtgaaatgctccagtcgaacagatgtcagtgagaaagctgttgcctccagcacaacttcc
aatgaggatgaaagtcctgggcagacctatcacagagagagacggaacgcgatcacaatg
cagccgcagggtgggcaaggcctcggcaagatcagtgaagagccttccacgtcgagtgag
gaaagggcctcattaatcaagaaggagatccatggatctatatcgcaccttcctgaacct
tccgtaccttaccgtgggacgctctttaccatggacccccgaaatggttacatggaccct
cattaccatcctcctcacctttttccagcattccaccctcctgtaccaattgatgcgaga
catcatgagggacgataccattatgaaccatctcccattcctcctctgcatgtgccttct
gccttatctagtagcccaacatactcagagcttcctttccttagaatttccccgcaccga
aatcctgctgcaacatcagagtctcccttcagcacccctcacccatacattaacccctac
atggactacatcaggtccctgcacagcagcccgtccctctccatgatctcggcagcccgt
ggactcagcccaacagacgctccacatgctggcgtcagtccagctgaatattatcatcag
atggctctgttggcaggccagcgcagcccgtatgcagacatcattccttcagctgccact
gcaggagccggggctcttcatatggaatatcttcatgccatggatagcgccaggtttcca
agtccgaggttgtcagctagaccaagccgaaagcgcacgttgtccatatcccccctctct
gatcacagctttgaccttcagaccatgatacggacatctccaaattccttggtcacaatt
ctcaataattctcgtagcagttcatcagccagtggttcttacggtcacttatctgcaagt
gcaataagccctgctctgagtttcacataccctcctacaccagtatccctccagcaaatg
catcagcaaattataagtcgtcagcaaaccctaggttcagcctttggacacagccctcca
ctcatccatcctgctccaacttttcctacccagagacctatccctggcatccccagtgtc
ctgaaccctgtccaggtcagctctggaccttctgagtccacacagcagaataaacccaca
agtgaatctgcagtgagcagcacaggagaccccatgcacaacaagcgctccaagataaag
cctgacgaggacctccccagcccaggagcaggaagcatgcaggaacagccagaaggaatg
accttggtaaaagaggaaggggacaaagatgaaagcaaacaggagcctgaagtggtctat
gagacaaactgccactgggaaggctgttcccgggagtttgacacgcaggaacagctagtg
catcatatcaacaatgaccacatacatggtgagaagaaagagtttgtgtgccgatggctg
gactgttcccgagagcagaaacctttcaaagcccaatatatgctggtggtccacatgagg
agacatacaggggagaagccacacaaatgcacttttgaaggttgtacaaaggcctactcc
agactagaaaacttgaaaacgcacttgagatctcacactggagagaaaccatatgtgtgt
gaacatgaaggctgcaacaaagctttctccaatgcctctgacagggccaagcaccaaaac
aggactcattccaatgaaaaaccatatgtttgcaagataccgggctgcacgaagcgctac
acagaccccagctctctccggaagcacgtgaagaccgtgcatggcccggaggcacacgtc
accaagaagcagcggggagatatccacccacggcctccgccaccgagggacccaggcagc
cactctcagacccggtcaccaggccatcagactcagggtgcaattggtgagcagaaggac
ctcagcaacactacctcaaagcgtgaagaatgcctccaagtgaaagcagtcaagtcagaa
aaaccaatgacatctcagccaagccctggtggtcagtctacatgcagcagcgaacagtcc
cccatcagcaactattccaacaatgggatcgagcttactctgaccggtggtggtagtgta
ggagacctcagtgtcatcgatgaaaccccaatcatggactctaccatttccacagccacc
acagcacttggcttacaggccaggaggaatatgacagggaccaaatggatggagcaagtg
aaattagaaaggttgaaacaagttaatggaatgcttccaagactgaaccccgttccacct
tccaaagccccgactttgctgcctctcataggaaacggtacccagtcaaacagcagctgc
agtgttggaggatccatgactattctgccaaacaggaatgaactctcaagtacagacatc
actgtgttgaacatgctgaacaggagggacagcaatactagcacaatcagttcagcctac
ctgagcagcaggaggtcctctggaatctcaccttgtttctccagccggaggtccagcgat
gcctcccaggcagagggaagaccgcagaatgtgagcgttgcagactcctacgaccccatc
tcaacggatgcttcccggcgctccagtgaagcgagccagtgtgatgacctgccaagtctt
ctcagcctcaccccagcccagcaatacaggctgaaagctaaatatgcagcagctactggt
ggacccccaccaactccactgcctaacatggagaggatgagcctcaagacaaggatggca
ctcttgggtgattgcagggagtctggagtatctccactgcctccagtgaatgtccctcga
agatgtagtgatggtggggcaaatggttacagcaggaggcattttctgtctcacgaagct
ttaggaaatgggacaaggagagccagtgatccagtcagaatggcctctgacaacctctct
gtcccaagggtccagcgtttcaacagtcttaatagctttaaccctcctgctttgcttcca
tccatggaaaagcgcagccttgttcttcagaactacacccgttctgagggtggcgtcttc
cgtggcttcagctccccctgtcctccaagcatcagtgagaatgtcaccctggaggctgct
acaatggaagcaggtagcagtctgaatgatgaggatctcctgccagatgacgtggtccag
tatctgaattcccagaaccagggcatgtatgaccatttgttgaacaatgtcctagacagc
aacaaaatgcatcacagttcagtttcaggaaacaacaaccccagcaactttgaccaagcc
cctgcaccaagcagtcagcaggcaggtcccgaggcaaataagagcgacttgcccattcag
tggaatgaagtaagctcagggagttctgacttatctccttcaaagctgaaatgtggtcag
cggtcagcagtgcagcaggctaggaccttcagactgtataacaatatgatggttcagcag
cagaacctggagagaagcaacatgagccagcagaatggctatcagaacctggtggagaac
aacgcttcctacagtttacagcaaaacatgactcttggcaccggagctgggaattctttc
agcatgcagtccaacaagccttacagtgaaagcatgggcaggcaagcaatgatgtctggg
gtgacagacaattcctgtggcatggcagtgcaagggcagaagctgagaatcagcaacatg
ccagtgaatgggaaccaacaaaatttcagccatcccctggcatccagtgaccagaccacc
agtatggcagacgggatgcaggacaggaatatgatggaacaagaatatttgcaaagccag
ccagtcggagatggcgttcattaccagggagtcagtcaatctggtcaaatgatgctaggg
caggttagtcctacctcacaaggcagcctgtatcaagggctgcagagttgtccactggcg
tctcacaccattggtagccagccttcaggtttgtcagtggccaaaagttaccagtcatgc
tctaattacagcagcaacagacggcaaaatgtgttgagaaacaacctgtcccaacagcaa
agacacacaagtgatggcaaccagatgtacagggtaaacaccattaagatggaaatgcaa
ggtcaatcacagcagttctgctctaacatgcagaattactctggtcagttatatgaccaa
accatgggctttagccaccaagctatgaaaacaggttctttctttggttcagaagccagc
tgcctgctgcaggggactgcaactgaaaactcctctgagcttctttccccaggggctaac
caagtgtcaagcacagttgacagcattgacaacaacagtctagagagtgtgcagatagat
tttgatgctatcatagatgatggggaccatgtcagcttaatttcgggagctctgagccca
agtatcattcaaaatgtctcccgcaattcctcacgcctcaccactccccgaccatctctt
acattcccaggtatgcctgtaagcacaaccaacatggctattggggacatgagttctttg
ttgacctcacttgcagaagaaagcaagtttcttgctgttatgcaatag
DBGET
integrated database retrieval system
