| Entry |
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| Symbol |
ERCC3
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| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
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| KO |
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| Organism |
ccic Cinclus cinclus (white-throated dipper)
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| Pathway |
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| Brite |
Enzymes [BR:ccic01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134047254 (ERCC3)
Transcription machinery [BR:ccic03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134047254 (ERCC3)
DNA repair and recombination proteins [BR:ccic03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134047254 (ERCC3)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
9:15172809..15192409
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| AA seq |
780 aa
MGRKERDKKKSKKRHYDDDEDDEDEGAGKEPQEAVPSAAGKQVEESGTKVDEYGAKDYRL
QMPLKADHNSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIKECRLRNAEGEETELITETFTSKSAISKSSEGGLGPSTSQGTDAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSTKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHTSRSKASANKHIHPLFKRFRK |
|---|
| NT seq |
2343 nt +upstreamnt +downstreamnt
atggggaggaaggagcgggataagaagaagtccaagaagcgccattacgatgacgacgaa
gacgacgaggacgaaggtgccgggaaggagccgcaggaggcggtgccgtcggcggcgggg
aagcaggtggaggagagcggcaccaaggtggacgagtacggcgccaaggactaccggctg
cagatgcccctgaaggccgaccacaactcgcggcccctctgggtggctcctgatggccat
atatttttggaagccttttctccagtttacaaatatgcacaggactttctggttgccatt
gctgagcctgtgtgcagacccacccatattcatgaatacaagctgactgcttactccctg
tacgctgctgtgagtgtgggcttacagacaagtgacatcaccgagtatttgcagaaactc
agcaagactggtgtcccagatgggataattcagtttatcaagctgtgcaccgtcagctat
gggaaggtgaagctggttttgaaacataacaggtattttgtggaaagtacccaccctgat
gtcatccagcagcttctgcaagaccatgtaattaaagaatgtcgcttgagaaatgctgaa
ggtgaagagacagagctcatcacagagacattcacaagtaaatcagcgatttccaaatcc
agtgaaggtggccttggtccatcaacttcacagggaacagatgctcagaataagccagat
gtcccagctgacttatttgagttttatgaacagatggacaaagatgaggaggaggaggag
gaaacacagacggtgtcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggagtaccccttgctggcagaatatgatttcagaaatgattctgtgaat
cctgatatcaatatagatctgaaacctactgcagtcctccggccctatcaagagaagagc
ctaaggaagatgtttgggaatggacgagccaggtctggtgttattgtcttgccatgtggt
gctggcaagtctctggtgggagtgacagctgcgtgcactgtgcgcaagcgctgcctggtg
cttgggaattctgccgtgtctgtggagcagtggaaggcccagttcaagatgtggtccacc
atcgacgacagccagatctgtcgcttcacatctgatgccaaagacaagcccattggctgt
tctgttgccatcagcacatattccatgttggggcacacgacaaaacggtcttgggaagca
gaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatactggatgaagtc
cataccatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcattgtaaa
ctggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctg
attggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgct
aaagtccagtgtgctgaggtctggtgcccaatgtcacctgaattttacagagaatatgta
gctattaaaacaaagaaaaggatactgctctacaccatgaacccaaataaattcagagcc
tgtcagttcctgattaagtttcatgagcgacggaatgataaaatcatcgtctttgctgac
aatgtgtttgcactgaaggaatatgcagttagacttgggaaaccctatatctatggccct
actgcacaaggggaaagaatgcagattctacaaaacttcaagcacaatccaaaaatcaac
actattttcatttccaaggtaggggacacgtccttcgatctgccagaagccaatgttctc
attcagatttcatcccatggtgggtcacgaaggcaggaggctcaaaggctgggacgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattcccttgta
tcccaagacactcaggaaatggcatattccacaaaacggcaacggtttcttgtagatcaa
ggttatagcttcaaggtgatcacaaagctggcaggcatggaagaagaagaactttcattt
tcaaccaaagaagaacagcagcagcttctccagaaagtcctgcaagcatctgacctggat
gctgaggaagaagtagttgctggagaatatggttcaaagtcagctcaggtgtcccgtcgc
acaggcaccatgagctccatgtctggagcagatgacaccgtttacatggagtaccacacc
tcgcggagcaaggcatctgcaaacaaacacatccaccccctgttcaaacgcttccgcaag
tga |
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