Cinclus cinclus (white-throated dipper): 134047322
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Entry
134047322 CDS
T10813
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2 isoform X1
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ccic01100
Metabolic pathways
Module
ccic_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134047322 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccic01003
]
134047322 (CHPF)
Enzymes [BR:
ccic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
134047322 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
134047322 (CHPF)
Glycosyltransferases [BR:
ccic01003
]
Glycan extension
O-Glycan
134047322 (CHPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
134047322
NCBI-ProteinID:
XP_062354375
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All DBs
Position
9:13364377..13368557
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AA seq
771 aa
AA seq
DB search
MRLSLVLSVLRPAGPVAIGVSLGFTLSLLSVTWVEEPCGPPPRPATRPHPDGGPAPPPGP
ANGNAARRPNAVPAALGADNWEPRVVPYRPPSPGRAAKKAVRTRYISTELGMRQRLFVGV
LTSKSTLNTLGVAVNRTLAHRLERLVYFTGTRGRKVPHGMTVVTHSDERPIWNMYQTVRY
LLDHYVNDFDWFFLVQDDTYTEAHRISRLVAHLSIDTHLYLGRPEEFIGGDTEGRYCYGG
FGYLLSRSLLLLLQQHLESCRNDILSARPDEWLGRCIIDYTGVSCAEEHEGLHYHYFELG
KNADPERETDLRFQSAFTVHPVLDPLQMYRLHKYFAQVELERTYQEIQQLQMEIQNASSL
SVDGDHVATWPIGIPPPFQPKTRFEVLRWDYFTEEQVYACVDGSPKCELHGVDLADVADV
VATAMEELNRKYQPVLHVRKQQLVNGYRRFDPTRGMEYTLDLQVEVVTQKGHSRSVTKRV
HLVRPLSEVEIIPMPYVTEASRINVILPLTAHDRDYAAHFLEAYAAAAFESSENAVLTFL
FIYDPFEAQQVTQNDIFASVKSQITEYERKYAEVKIPWISVKTDAPSQIKVMDIISKKHP
VDTLFFVAGVGTEVTTDFLNRCRMNTINNWQVFFPIHFQGYNPAIAYHNQVPPTTLDLLR
DMGRFDRDVFHEACFYNADYMAARTRMAGDVQENEDILETLDIYDMFIKYSNLHVFRAVE
PALLQHYRHQACNPRLSEDIYHRCVQSSLEGVGSRSQLAMVLFEQEQGNST
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtcgctggtgttgtcggtgctgcggcccgccgggcccgtcgccatcggcgtc
tcgctgggcttcaccctcagcctgctcagcgtcacttgggtggaggaaccctgcgggccg
ccgccgcgccccgccacccgcccgcaccccgacggcggccccgcgccgccccccggcccc
gccaacggcaacgcggcgcgcaggcccaacgccgtgcccgccgcgctgggcgctgacaac
tgggagccccgcgtcgtgccctaccgcccacccagccccggcagggccgccaagaaggcc
gtcaggacccggtacattagcacagagctggggatgcggcagcggctcttcgtgggtgtg
ctgacctccaagagcacactgaacacactgggggtggctgtcaaccgcaccctggcccac
cgcctggagcgcctggtgtacttcacaggcacacggggccgcaaggtgccccatggcatg
acggtggtgacgcacagtgacgagcggcccatctggaacatgtaccagactgtcaggtac
cttctggaccactacgtgaatgatttcgactggttcttcctggtacaggatgatacctac
acggaggcacaccgcatcagccgcctggttgcccacctcagcattgacacccacctctac
ctgggtcgtcctgaggagttcatcggtggggacactgagggacgttattgctatggaggg
tttggctacttgctatcccgcagcctcctcctgctcctgcagcagcacctggagagctgc
cgcaatgacatcctcagtgcccggcctgatgagtggctgggccgctgcatcattgactac
acaggtgtcagctgtgctgaggaacatgagggtctgcattaccactattttgagctgggg
aagaacgcagaccctgaacgggagactgacctccgtttccagagcgccttcactgtccac
cctgtgctggatcccctccagatgtaccggctgcacaagtactttgcacaggtggagctt
gagagaacctatcaggagatccagcagctccagatggagattcagaacgccagcagcctg
tctgtggatggggaccatgtcgccacatggcctattggcatcccacccccattccagcct
aaaacccgctttgaggtgctgcgctgggactacttcacagaggagcaagtctatgcctgt
gtggatggctcccccaagtgtgaactgcatggtgtggatctggcagatgtggccgatgtg
gtggccacagccatggaggagctgaaccgcaagtaccagccagtgctccatgttcgcaag
cagcagctggtgaacgggtaccggcgcttcgaccccacacgtggcatggagtacacgctg
gaccttcaggtggaggtggtcacccagaaggggcacagccgctctgtcactaagcgagtg
cacctggtgcggcccctcagtgaggtggagatcattcccatgccatatgtgacagaggcc
agtcgcatcaacgtcatcctgccactaacggcccatgaccgggactacgctgctcacttt
ctggaggcttacgcagcagcggcttttgagagcagtgagaatgcagtgctcaccttcctc
ttcatctatgacccctttgaggcccagcaggtcacccagaatgacatctttgcctctgtg
aagtcccagatcactgagtatgagcgcaaatatgcagaggtaaagatcccctggatcagt
gttaagacagatgcaccctcccaaatcaaggtcatggacattatctccaagaagcatcct
gtggacacacttttctttgtggctggcgtggggacagaggtcaccactgacttccttaac
cgctgccggatgaacaccataaacaactggcaggttttcttccccatccacttccagggc
tacaacccagccattgcttaccacaaccaggtgccacccaccacgttggacctgctgagg
gacatggggcgctttgaccgtgacgtcttccatgaagcctgcttctacaatgccgactac
atggcagcacgcacccgcatggcaggggacgttcaggagaatgaggacatcctggagacc
ctggacatctacgacatgttcatcaagtactccaatctccatgtcttccgggctgtagag
cctgccctgctgcagcactaccggcaccaggcctgcaacccccggctcagtgaggacatc
taccaccgctgtgtgcagagcagcctggagggtgtaggctctcgctcccagctggccatg
gtcctttttgagcaggagcagggaaacagcacctga
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