Cinclus cinclus (white-throated dipper): 134047343
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Entry
134047343 CDS
T10813
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134047343 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134047343 (XRCC5)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134047343 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
134047343
NCBI-ProteinID:
XP_062354411
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Position
9:complement(15020711..15069659)
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AA seq
727 aa
AA seq
DB search
MAPSGKVAIVLCVDVGLTMSSSYPGEESSLDQAKKIMTKFVQRQVFAESKDEVAVVLFGT
NGTSNGLASEDQYQNITVHRSLQLPDFDLLEDIQDVIKAGSKQADFLDAIIVCMDLLQKE
TIGKKYEKRHIELFTDLSSPVSEDQLGIIIANLKKTGISLQFFLPFPVSADDGSGDTSAS
VHAHMHRDSFPGKGLTEQQKQGIDVVRKLMYTLDEEGGLEEVYTFRESLERLSMFKKIER
KPFPWPCELTIGPNLSIRIVAYKSVAEERVKKVWAIVDAKTLRKEDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTKSSQIQQHYYMGYQAL
KVFAAKDDENAAVAFSALVRALDELKVVAVVRYAYDRRCNPQVGVAFPYIKDAYECLIYV
QLPYMEDLRQYVFSSLKISKKYIPTADQLSAVDSLIDSMNLVHEDGETFEDLFKPSKIPN
PHFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEMPCVVRERCQAPLERVKALFPLKEVGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEGSFSIMKLAEGSITSVGSVNPAEDFRILVRK
KNADFKDVSQQLINRIDQFLENKGSQYYMKGVDCIRVFREEAMKLSKVQCFNDFLQALKS
KLEDKALSDFWEIMVQDRISLITKDEAEESLVTGEEAEKFLAPKEQKNETLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagcggcaaggtggcaatagtgctgtgcgtggatgtaggccttacaatgagc
agttcttaccctggtgaagagtcttcacttgaccaagccaagaagattatgacaaagttt
gtgcagcgacaggtttttgctgagagtaaagatgaagtagctgtagttctctttggcact
aatggcactagcaatggccttgccagtgaggatcaataccaaaacattactgtacatagg
tcactacaactgccagattttgatttgctggaagacattcaagatgtgattaaagcaggc
tctaaacaagcagactttttggatgctattattgtgtgtatggacttgcttcagaaggaa
acaataggaaagaaatatgagaagagacacattgaactgtttacagaccttagtagtcct
gtcagtgaggatcagctgggaattatcattgctaacttgaaaaaaacaggaatttcactt
cagttttttctgccgtttccagtgagtgctgatgatggaagtggagatacaagtgccagt
gtacatgctcatatgcacagagattcttttccaggaaagggtttaactgaacagcaaaag
caaggtattgatgtggtgaggaaactcatgtatacattggatgaagaaggagggctggaa
gaagtttacactttcagagagagcctggaacgtctttcaatgtttaagaaaatagaaaga
aagccttttccttggccctgcgagctcactattggtcctaatttgtctataaggattgtg
gcctacaaatcagtcgcagaagagagggtaaagaaagtttgggcaattgtggatgctaaa
accctgagaaaagaggatgtgcaaaaagaaactgtttactgcttgaatgatgatgatgag
acagaggttcaaaaggatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtc
ttgggatttactaagtcctctcagatccagcagcattactacatgggctatcaggctctg
aaggtctttgcagcaaaagatgatgagaatgcagcagttgctttttctgcacttgttcgt
gcattggatgagttgaaagtggtggctgtagtgcgctatgcttatgatagaagatgcaac
ccacaagttggagtagctttcccgtatattaaggatgcatatgagtgtctcatctatgtg
cagctaccctatatggaagacctaagacaatatgtattttcatccttgaaaatcagtaaa
aagtacattcctacagcggatcagttatctgctgttgattcactgattgattctatgaat
ttggttcatgaagatggagaaacttttgaggacctatttaagcccagcaaaattccaaac
cctcattttcagaggttatatcagtgtttgcagcacaaggcttttcaccctgataagcca
ctgccaccaatagagcagcaccttttagaaatgctggagatgccttgtgtggtaagagaa
agatgtcaggctcctctggaaagagtaaaagcacttttccccctaaaggaagttggcaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaacgaagatgaacccagcctt
aagaaaccaaaaattgaagatgaggaagggagctttagcattatgaaacttgctgaaggc
agtatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagacgtgagtcagcagttgataaaccgcattgatcagttcttg
gaaaataaaggttcacagtactacatgaaaggtgtcgactgtatcagagtttttagagag
gaagccatgaagctgtctaaggtgcagtgctttaatgactttctgcaagccttgaaatca
aagttggaagataaagctttatctgatttctgggagatcatggtacaagacagaatttct
ttgatcactaaagatgaagcagaggaaagtttggtgacgggtgaagaggctgagaagttc
ttggctccaaaagaacagaagaatgaaaccctgcctcctactgatgaaggtggtgatgtt
gatgatctgttggacatgatgtga
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