Cinclus cinclus (white-throated dipper): 134047425
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Entry
134047425 CDS
T10813
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134047425
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134047425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
134047425
NCBI-ProteinID:
XP_062354520
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Position
9:complement(11053577..11106607)
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AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSL
GENGTFINATVTTFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVDIGKNLAY
LKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVE
EGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRLKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKEKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgctatttcacaagagaa
tcacttgcagctattgaacagcgtatcaatgaagagaaagctaaaaaatccaaacaggaa
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
accctgccatttatttacggtgacatacctccaggaatggtgtccgagcccttggaagat
ctggacccatattatatcaataaaaaaacatttatagtattgaataaaggaaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaatcctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacgtttctccgagacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagactatagtgggagcc
ctgattcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttccatctttaatagctcttta
ggtgaaaatggtacatttattaatgcaacagtgacaacatttaactgggatgaatacatc
gaagacaaaagtcatttctacttcttggaagggcaaaatgatgcactgctgtgtggcaat
agctcagatgcaggtcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgactctgcgtgctgctgggaagaca
tacatgattttttttgttttggtcatttttctgggctctttctatctgataaacctgatc
ctggctgtggtcgccatggcctatgaagaacagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcaacaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcggcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcagaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatacgaaaagagattctcttccccacaccagtctctg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtgggatcagaaaatgactttgctgatgacgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacacggtgaa
cggcgcaacagtaacattagccaggccagtaggtcatccagaacagtgcctgcacttcca
gcaaatgggaagatgcacagcaccgtggattgcaatggagtggtttctttagttggtggg
cctccagctttgacatcgcctacaggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagaaactgacttaagaaagagacattctagttct
taccatgttcctatggactacctaacagaccctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgtccaccc
tgctggtataaatttgctaacacttgtttgatttgggactgctgtactccctggctgaaa
gtgaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattaccatc
tgcatcgtcctcaacaccctgttcatggccatggagcactacccaatgacagaacagttt
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagaaggctggaatatttttgat
ggttttattgtgagtcttagtttaatggaactgggccttgcaaatgtagaaggattgtcc
gtccttcgatcattccgattgcttcgagttttcaaattggcaaaatcttggccaacccta
aatatgctgattaagattattggcaactcagtgggggctctggggaatctgaccctggtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctccagtgactgtgaacttcctcgatggcacatgcatgac
tttttccactctttcctgattgtgttccgagtgctgtgtggagaatggatagaaaccatg
tgggactgcatggaggttgcaggccaaaccatgtgccttacagtcttcatgatggtcatg
gtgattggaaatttagtggtactcaacctatttctggccttgctgctgagttcgtttagt
tcagacaacctcgctgctacagatgatgataatgaaatgaacaatctccagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaatttatccaaaaa
gcctttgttagaaaacagaaagttttagatgaaatcaaacctcttgaagatctaaacaat
aaaaaagacagctgtatttccaaccatacaatagtagacataggtaaaaaccttgcttat
ctcaaagatgggaatggaacaaccagtggcataggcagcagtgtggaaaaatatgttgtt
gatgagagtgattacatgtcattcataaacaacccaagtctcaccgtgacagtgcccatt
gctgttggagaatcagattttgaaaatttaaacacagaggagttcagcagtgaatcagac
ctggaagaaagcaaagagaagttgaatgcatccagttcatcagaaggcagcacagttgat
attggactacctccagaaggtgaacagccagaagcagaacctgaagaagttctagagcca
gaagcttgttttacagaagggtgcgtacggagattcaaatgctgtcaagtcagtgtcgaa
gaaggaaaggggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcatagtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatctacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gttttcacctatatcttcattctggaaatgcttttaaaatgggttgcttatggcttccaa
acctattttactaatgcatggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcacgatttgaagggatgagggttgtggtg
aatgccctgttaggagcaattccatctattatgaatgtgcttcttgtttgccttatattc
tggctgatatttagtatcatgggagtaaatctatttgctggaaagttttactattgtgtt
aacactacaaccgatgagagatttgatatcagccaaattaacaactttagtcaatgtgag
gagctcatacaaaacaatgaaactgcccggtggaagaatgtgaaggttaactttgacaac
gtaggccttggttacctttctctgctccaagtggccacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagccgaagtatgaagataacttg
tacatgtatctttactttgtcatctttatcatctttggatcattttttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattttatattggattaac
ctggtgttcattgtccttttcactggagaatttgtcctgaaattgatttcacttcgccat
tactacttcactataggctggaatatttttgattttgtggttgtgattctctccatagta
ggtatgtttttggctgagatgattgagaagtactttgtatctcccacactcttcagagtc
atccggctcgccagaatcggtcgaatcctgcgcctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattgggctgctgctc
ttcctggtcatgttcatctacgcgatatttggcatgtccaactttgcctatgtcaagagg
gaagttgggatcgatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctg
tttcagatcaccacgtccgctggctgggacggtttgctcgccccaattctgaacagtggg
gagccagactgtgacccccataaagatcatccggggagctctgtgaaaggtgactgtggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcctttctggtagtg
gtgaacatgtacattgctgtgattttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagtgaggatgactttgagatgttctatgaagtctgggagaagtttgatccc
gatgcaacacaattcatagagttcagtaaattatcagattttgcagcttcgttagatcca
cctcttctcatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggtg
agcggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgtcttgggg
gaaagcggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttccaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtg
tctgctgtcatcattcagcgtgcttacagacgtcaccttttaaggctaaaagtcaaaaaa
gtatcatgtatatttagtcaggataaaggtaaagaggaagatgatctgcccatgaaagaa
gatatgatcatggataaactaaacgagaactccactccagaaaaaacagatatgacccca
tccacaacctccccaccctcttatgacagtgtaacaaagccagacaaagaaaaatatgaa
aaagacaaatcagaaaaagaagataagggtaaagacagcagggaaagtaaaaagtaa
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