Cinclus cinclus (white-throated dipper): 134047441
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Entry
134047441 CDS
T10813
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccic01002
]
134047441
Peptidases and inhibitors [BR:
ccic01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
134047441
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
134047441
NCBI-ProteinID:
XP_062354564
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Position
9:complement(9946478..9979035)
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AA seq
1223 aa
AA seq
DB search
MRDVQKYEGKVCAVVMGEEGEHNWTGNKQIMLLRFWWLFWILEHHEFLAENLREEKIYGL
RRSKPKHFLSNIAENYPSSSDQDEDCVLEIAFLLDSSESAKDYNHEQQKKFVLQTVDRMK
SLQLSSGRTLRWRMALLQYSSSVFMEQTFHDWKGPEAFKSHIAPITHIGHGTYTTYAITN
LTQLYMTEGTLGSVKVAVLFTDGVDHPRNPDIFAAMADAKHQGIVFFTMGMTRVAEEVSN
AAKLRLLASVPASRFVFNLQQKETVEKVLKEMKDLFEEECPQANKCNCEKGEKGLPGPAG
KMGRTGDEGAPGLKGAKGEPGLNGIPGRDGIEGKSGYKGEKGERGECGIPGIKGDRGPEG
PVGPQGIRGIQGLQGQSGDQGPEGLQGSKGERGHPGPPGLPGETGIGLPGPKGNTGLTGR
PGPIGPPGAGEPGVMGPQGPQGVQGERGSPGEGLPGAKGDRGFDGPKGPRGLPGISIKGE
KGECGPPGLPGSVGLPGIGIQGEKGVEGPKGPPGSRGLPGQGIPGPKGEQGLPGETGVPG
ERGIGEPGSKGEPGPSGLAGLPGLPGEDGAPGQKGEPGLPGLRGPEGSPGIGIQGEKGDQ
GQRGIRGLTGPIGVPGPVGAKGEPGAPGRFGMPGPPGRSVPGPKGDIGLPGLVGPIGEPG
FGLPGAKGDQGLPGPPGPFGQKGDGYPGPPGLPGLPGTPGEQGPDGVGLPGPKGDPGSRG
PIGSPGSPGKGLPGPKGSIGRPGPPGSLGPPGEGIQGTKGEQGIQGMPGPRGPPGDGLLG
EKGDRGATGDKGKKGEKGDVGDPGLSGEPGKTGPKGDQGLTREDIIKLIKEICGCSVKCK
EIPMELVFVIDSSESVGPENFEIIKDFVTALVDRVTVGRNATRIGLVLYSLEVRLEFGLN
KYPTRQDVKRAVRRMQYMGEGTYTGTAIRKATQEGFSGARAGVRKVAIVLTDGQTDKREA
VKLELVVREAHAANIEVYAIGIVNTSDPTQAEFVHELNLIASDPDREHMYLIDDFNALSA
LESKLVNQFCEDEHGALVYNHNENASISGQSFHSLSPSSLHYILKKNNVNRQSLSAQTLE
VSTVESPLSLGHLPQPLAPANIPPVVYEAYEEEQDEEKQPTLLTVNTRAVLPLSSKQPPS
NKVMTSSLSTAGPTPRPESTADPRCKLRLEQGPCRVYTIRWYYDQQANACAQFWYGGCDG
NANRFQSEQECRQACVFFSGGRN
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgtgcaaaagtatgagggtaaagtgtgtgccgtagtgatgggagaagagggc
gaacacaactggactggaaacaaacaaattatgctcctcagattctggtggcttttctgg
atacttgaacatcatgagtttttagcagaaaatctcagggaagagaagatatatggactg
agaagatcaaaacctaaacactttttgtcaaatattgcagaaaattatcccagctcaagt
gatcaagatgaagactgtgttctggaaattgcttttttactggacagctccgaaagtgct
aaggactataatcatgaacaacagaaaaaatttgtactgcaaacagtagacagaatgaaa
agtcttcagcttagttctggacgtacccttcgctggaggatggccttacttcagtacagc
agttctgttttcatggagcaaactttccatgactggaaaggtcctgaagcattcaaatcc
cacattgctcccatcacccacataggtcatggcacctatacaacttatgctatcactaat
cttacccaactctacatgactgaagggactttgggtagtgtaaaagtagccgtgcttttc
actgatggagtggaccatccaagaaacccagatatttttgcagctatggctgatgctaaa
caccaaggaattgtatttttcacaatgggaatgaccagagtagctgaggaggttagcaat
gctgccaagctccggctcctggccagtgtcccagcatccaggttcgttttcaacctccag
cagaaagaaactgtggagaaggttctcaaagaaatgaaagacctgtttgaggaagagtgt
ccccaggctaacaaatgtaactgtgagaagggggaaaagggccttcctggtcctgctggt
aaaatgggtcgcactggggatgagggagctccaggcctgaaaggagcaaagggagagcca
ggtcttaatggaatcccaggacgagatggaatagaggggaaatctggatataaaggagag
aagggtgaaagaggtgaatgtggaatcccaggaataaaaggagacagaggccctgaaggt
ccagtaggcccccaaggaataagagggattcagggtctgcaaggacaatctggagatcaa
gggcctgaaggcctgcaaggatcaaagggtgaaagaggtcaccctgggccacctggcttg
cctggagagactggaataggacttccaggcccaaagggtaacactggtttgacaggaaga
ccaggacccattggcccacctggagctggtgagccaggagttatggggcctcaaggacca
caaggtgttcaaggagaaagaggttcaccaggagaagggcttccaggagcaaagggagac
cgtggctttgatggaccaaaaggccctcgtggacttccaggcatcagcataaaaggtgaa
aagggtgaatgtggtcctcctggtttaccaggatcagttggattacctggaattggaatt
caaggagaaaagggagtggagggcccaaaaggaccacctggctctagagggctaccagga
caggggataccaggaccaaagggtgaacaaggcttgccaggagagactggagtgccagga
gaaagaggtattggagaacctggttctaagggtgaaccagggccttcaggactggcaggt
ctgcctggtcttccaggagaagatggagcccctggacaaaagggtgaaccagggttgcct
ggtcttagagggcctgaaggttctccagggattggaatacagggggaaaagggagaccaa
ggacagagaggaatacgtggattaacaggaccaataggagtgcctggacctgttggagct
aaaggggagcctggtgcaccaggacgttttggaatgccaggccctcctggaagatctgtg
cctggaccaaagggtgacattgggctacctggtcttgttgggccaattggagaaccaggt
tttgggcttcctggggcaaagggtgaccaaggccttccaggaccccctgggccctttggg
caaaaaggagatggttatcccggcccacccggcttgccaggcctccctgggactcctggt
gaacaaggcccagatggagttggactaccaggacctaagggtgatcctggtagtagagga
ccaattggctcccccggttccccaggaaaaggtctgccaggaccaaaaggaagcatagga
cgcccagggccaccaggctctctgggacctcctggtgaaggtattcaaggaactaagggg
gaacaaggtattcaaggaatgccaggaccacgaggcccccctggagatgggcttctggga
gagaagggagatcgaggagctacaggtgacaaggggaaaaaaggagaaaaaggtgatgtg
ggtgaccctggtttatctggagaacctggcaaaactggaccaaagggagaccagggccta
acaagagaagatataattaaattaattaaagagatatgtggttgcagcgttaaatgtaaa
gaaattcctatggagcttgtatttgtgattgatagctctgagagtgtgggaccagaaaat
tttgagattatcaaagactttgtaactgctttagtagacagagtaactgtaggcagaaat
gctaccagaattggccttgtgttgtacagtttagaagttcggctagaatttggtctcaac
aagtatccaacccgacaggatgtcaagcgagcagttagaagaatgcaatacatgggagaa
ggcacttacacaggaactgctatccgcaaagcaacccaggaaggattttctggtgctcga
gcaggggtgcggaaagtagctattgtgctaacagatggccaaacggacaagagagaagct
gtaaaactggagcttgttgttcgagaggctcacgcagcaaacatcgaagtgtacgcaata
ggaattgtaaatacttcagatccaacacaagccgagtttgtgcatgagctaaatctgatt
gcttcagacccagacagagaacacatgtatctcattgatgactttaacgccctctcagct
ctggagtccaaattagtcaatcaattttgtgaagatgaacatggagccttagtatacaac
cataacgaaaatgcaagtataagtgggcaatccttccattcattatctccaagttcttta
cattacatacttaagaaaaacaatgttaatagacagtcactttcggcacagacacttgaa
gtatctacagtagaaagtcctctgagtcttggccatcttcctcaaccattagctccggcc
aacatacctcctgtagtctatgaagcctatgaagaggagcaagatgaagaaaaacagcca
acccttctaacagtaaacactagagctgtgttaccattgtcatctaaacaaccaccatct
aataaagtgatgacatcatctctttcaactgcaggccccacaccaagacccgaaagtact
gcagacccccggtgcaagctaaggctggagcaagggccatgccgtgtttacacaatcaga
tggtattatgatcaacaagccaatgcttgtgctcagttttggtatggtggctgcgatgga
aatgcaaaccgctttcagtctgaacaggaatgtagacaggcttgtgtatttttttctgga
ggtaggaattag
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