| Entry |
|
|---|
| Symbol |
PRPF40A
|
|---|
| Name |
(RefSeq) pre-mRNA-processing factor 40 homolog A
|
|---|
| KO |
| K12821 | pre-mRNA-processing factor 40 |
|
|---|
| Organism |
ccic Cinclus cinclus (white-throated dipper)
|
|---|
| Pathway |
|
|---|
| Brite |
Spliceosome [BR:ccic03041]
Complex A
U1 snRNP components
U1 related factors
134047463 (PRPF40A)
Complex B
134047463 (PRPF40A)
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
9:complement(28213196..28245950)
|
|---|
| AA seq |
1011 aa
MSGGDSTAAAAAASPQPLPFSLPKPPPLMQLTPGDAVRPVGSGADQSPKSARLAARPDWP
AGKPVSLLAPLLPPRGEPEPLLPFGPAAPRPPLRGRLLGRCGGSLLSPAMRPGAVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVLPGMM
MSHMSQAALQPTVPPGVNSMDTQVGVTPPGTQTSHAVVSTVQQSSSSSSSGSEELCRQKC
TWTEHKSPDGRTYYYNTESKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEAMIKAEENSAKPDDAAAAASAPAAASDTASGAGAAPGTESSAGAA
AAGAAPEGDPAAPAAAPAAAGDAESAGAAEEQGQPGAAPGAQDGNGDVGTAGADETAKQE
GAADAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPR
YSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAE
QMFGEMDVWNAISERDRLEIYEDVLFFLAKKEKEQAKQLRKRNWEALKNILDNMANVTYC
TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQ
RKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDLFKFYVED
LKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEK
AEAREREREKEEARKMKRKESAFKSMLRQATPAIELDAVWEDIRDRFVKEPAFEDITLES
ERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQR
SESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKEKKERERDSEKER
ARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ |
|---|
| NT seq |
3036 nt +upstreamnt +downstreamnt
atgtccggcggggattccacggccgcggccgccgccgcttccccgcagccgctgccgttc
tcgctgccgaagccgccgcccctcatgcagctgacgcccggcgacgccgtgcggccggtg
ggctcgggcgccgaccaatcgccgaagagcgcgcggctggcggcgcgccctgattggccg
gcggggaagcccgtcagcctgctggcgccgctgctcccgccccgcggggagcccgagccg
ctgctgcccttcgggcccgcggcgccgcggccgccgctgcgcgggcggctcctgggccgc
tgcgggggctccctgctcagccccgccatgcggcccggcgccgtggaccgcggctctctc
atgatgggacacccaggaatgccccactacccccccatggggatgcaccccatggggcag
agaccccccaacatgcccccagtgccccacgggatgatgccccagatgatgccccccatg
ggaggacccccaatggggcagatgcccggaatgatgcagtccgtgctgcccggaatgatg
atgtcccacatgtcgcaggccgccctgcagcccacggtgccgccaggagtgaacagcatg
gacacccaagtaggtgtgacccctcctggaactcagacaagccacgctgtggtgtccaca
gtgcagcagagctccagcagcagcagctctggcagtgaggagctctgcaggcagaagtgc
acgtggacagagcacaaatcccccgatggcagaacttactactacaacactgagagcaag
cagtccacgtgggagaaaccagatgacctcaaaactcctgctgagcaattgttatccaag
tgtccctggaaggaatataaatcagattctgggaaaccttattattacaattcccaaacc
aaggaatcccgctgggcaaaacccaaagagctggaggatcttgaagcaatgattaaagct
gaagaaaacagcgcgaagccggacgacgccgccgcggccgcctcggctccggccgcggcc
tccgacacggcgagcggggccggagcggcgccgggcaccgagagctccgcgggcgccgcc
gccgcgggagccgctcccgagggggatcccgccgctcccgccgccgctcccgccgccgcc
ggggacgcggagagcgccggcgcggccgaggagcagggccagcccggcgccgctcccggc
gcgcaggacggcaacggcgacgtcggaacggccggagccgacgagacggccaagcaggag
ggggcagcggatgctgctgcaaagaaggaggatgaggatgctcagccagtgaaaaaaacc
tacacgtggaacaccaaggaagaggccaaacaagcatttaaagagctgctaaaagaaaag
cgggttccatccaatgcctcctgggagcaggccatgaaaatgatcatcaatgaccccaga
tacagtgctttggcaaagctgagtgagaagaagcaagcctttaatgcttacaaagttcag
acagagaaggaggagaaggaagaagccagatccaagtacaaggaagccaaggaatccttc
cagcgtttcctggaaaaccatgagaagatgacatccaccaccagatacaaaaaagctgag
cagatgtttggggagatggacgtgtggaacgccatttccgagcgggaccgcctggagatc
tacgaggatgtgctgtttttcctggccaagaaggagaaggaacaagccaagcagctgagg
aagaggaactgggaagctctgaagaacatcctggacaacatggccaacgtcacctactgc
accacgtggtcggaggcacagcagtacctgatggacaaccccacctttgctgaggatgag
gagctccagaacatggataaggaggacgccctgatctgctttgaggagcacatcagagcc
ctggagaaagaggaggaggaggagaagcagaagagtttgctgagggagaggaggaggcag
aggaagaacagggaatccttccagctgttcctggacgagctgcacgagcacgggcagctg
cactccatgtcctcctggatggaattgtacccagccatcagctccgacatcaggttcacc
agcatgctgggccagccaggatccacggcgctcgacctgttcaagttctacgtggaggat
ttgaaagctcgttaccacgatgagaagaagataattaaagatatcctaaaggataaagga
tttgtggtggaggtgaacacgtcctttgaggatttcgtcaccgtcatcagctccacgaaa
agagccaccaccttggatgcagggaacatcaaactggctttcaacagtctgctggagaag
gcggaggcgcgcgagcgggagcgggagaaggaggaggcgcggaagatgaagcggaaggag
tcggcgttcaagagcatgctgcggcaggccacgcccgccatcgagctcgacgccgtctgg
gaggatatcagggacagatttgtgaaggaaccagcctttgaagacatcaccctggaatct
gaaaggaaaagaatatttaaggatttcctccatgtacttgagcacgagtgtcagcaccac
cactccaaaaccaagaaacattcgaagaaatccaaaaaacatcaccggaagcgctcccgt
tcccgctccggctcagagtccgaggatgacgacagccactccaagaagaagcggcagcgc
tcggaatcgcggtcggtgtcggagcgttcttccagcgccgagtccgagaggagttacaag
aaatccaaaaagcacaagaagaagagcaagaagaggaggcacaaatctgattccccggaa
tccgacgtggaacgagagaaggagaagaaggaaagagagagggacagtgagaaggaaaga
gccagacagagatcagagtccaagcataaatcccccaccaagaaacggcctggaaaagat
tccggaaactgggacacgtctggcagcgagctcagcgagggggagctggagaagcagagg
agaactctcctggagcagctggatgaggatcagtga |
|---|
