Cinclus cinclus (white-throated dipper): 134047487
Help
Entry
134047487 CDS
T10813
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04382
Cornified envelope formation
ccic04510
Focal adhesion
ccic04512
ECM-receptor interaction
ccic04514
Cell adhesion molecule (CAM) interaction
ccic04518
Integrin signaling
ccic04810
Regulation of actin cytoskeleton
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134047487 (ITGA6)
04514 Cell adhesion molecule (CAM) interaction
134047487 (ITGA6)
04518 Integrin signaling
134047487 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134047487 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134047487 (ITGA6)
04810 Regulation of actin cytoskeleton
134047487 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134047487 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134047487 (ITGA6)
04515 Cell adhesion molecules [BR:
ccic04515
]
134047487 (ITGA6)
04090 CD molecules [BR:
ccic04090
]
134047487 (ITGA6)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134047487 (ITGA6)
Exosomal proteins of breast milk
134047487 (ITGA6)
Cell adhesion molecules [BR:
ccic04515
]
Integrins
Integrin alpha subunits
134047487 (ITGA6)
CD molecules [BR:
ccic04090
]
Proteins
134047487 (ITGA6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
134047487
NCBI-ProteinID:
XP_062354686
LinkDB
All DBs
Position
9:complement(8936387..8978509)
Genome browser
AA seq
1126 aa
AA seq
DB search
MAALLLLYLPLLPGLAGAFNLDTDNVISWSGETGSLFGFSLAMHRQLQPQEKRLLLVGAP
REKAFPAQQANRTGGLYSCDIASPDANCIRVKFDEETDPNMESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDESRQD
KNLVPVPANSYLGLLFLTAVSDTHPDQFVYKTLPPSTQVDKSVDIMMNSYLGFSLDSGKG
IVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHMFEGEGLASSFGYDVAVVDLNS
DGWQDIVVGAPQYFDRSGDIGGAVYIYVNRQGKWAGVRPLRLNGTTDSMFGLAVENIGDI
NQDGYPDIAVGAPYDGFGKVYIYHGSKNGINTKPAQILDGEKTNTNFFGYSIAGNMDLDK
NSYPDVAVGSLSDSVNVYRSRPVISIRRNITVQPDRIDLKKKYSEDHGEIRMDVKACFKY
TANPRDLNPRIKISYTFEVENERRQLGLPSRVRFSDHSSDQFTASTTLRGQNSWECVTTK
LILQEKIKDKLRPIPISVSVKIAGLESPSKRRESVLPDLIPILNSNESETETTKVEFLKE
GCGDDNECHSNLKLQYRFCTRDGNEDRFTYLPLENGVPVLVLRDQKDIALEITVTNNPSD
VKNPQKDGEDAYEAKLIATFPDSLTYSAFREMRAYPEKQLTCGANQNGSQAECELGNPFK
RNSNVTFYLVLSTTKINIDTTDLAINLKLETTSTQVNLTPITASAKVVLELLLSLTGVAK
PSQVYFGGNIIGESAMKSEDDIGNLIEFEFRVTNLGRPLKAFGTASLDIQWPKEISSGKW
LLYLMKIDSKGLEKVSCQPENEINSLHLGESHNSRRKREVAEKQITDSQAFSLFSERKYK
TLSCNVNAHCVDIKCPLKGLDSKASIVLRSRLWNSTFLEEYSKMNYLDILVKASINVPVA
AKKVKLTNEVAQVRVTVFPEKTVAVYTGVPWWIIAVAVLAGILMLALLVFLLWKCGFFRR
SRYEDNVPRYHAVRIPKEERQIRDGKNQDPETKQWFTKWNENESYS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgctcctcctctacctgcccctcctgccggggctggccggcgcattcaac
ctggacacggacaacgtgatcagctggagcggggagacgggcagcctcttcggcttctcc
ctggccatgcaccggcagctgcagcctcaggagaagcggctattgctggttggagctcct
cgggaaaaggcctttccagcccaacaagccaacagaacaggagggctgtacagctgtgac
attgcatctccagatgcaaattgcatacgtgtcaaatttgatgaggagactgacccgaat
atggagagtaaagaagaccagtggatgggtgtaactgtccaaagtcaggggccaggagga
aatgtggtgacgtgtgcacatcgctatgagaaaaggcagtatgtaaacacagtgcaggaa
acccgggatatcattggaaggtgctatgtgctgagccaggacctcactattaaggatgat
atggataatggagtatggagtttttgtgatggtcgtttaagaggccatgagaagtttggt
tcctgtcagcagggtgttgctgctacttttactagagactatcattatattgtgtttggt
gctccaggcacttacaactggaaaggggtggttcgtgcagagcaaaagaatcagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagagccgccaggat
aagaatctagttcctgttccagctaacagttacttaggtcttctatttttgacagctgta
tctgatactcatccagatcagtttgtgtacaaaacattgcctcccagcacacaggtggac
aagtcagtggatataatgatgaatagctacttaggtttctctttggactctggtaaagga
attgtctcccaagatgagatgacttttgtgtccggtgccccaagagcgaaccacagcgga
gcagttgttttactgaaaaaagaaaaaaatcagagagcactttccctggagcacatgttt
gaaggagaagggctggcctcttcttttggctatgatgttgctgttgtggatctcaacagt
gatggctggcaggacatcgttgttggggccccgcagtactttgacaggagtggggatatc
gggggtgccgtgtacatctacgtgaaccgccaaggcaaatgggcaggggtgagacctctt
cgcttaaatggaaccactgactcaatgtttggacttgcagttgaaaacattggggacatt
aatcaggatggatatccagatattgcagtaggagctccatatgatggttttggcaaagta
tacatttatcatggatccaagaacggaataaatacgaaaccagcacagattcttgatggt
gaaaaaacaaacactaatttctttggttactctattgctggaaatatggacctggataaa
aattcctaccctgatgttgctgttggttctctgtcagattctgtaaacgtgtacagatct
cgacctgtgataagcattagaagaaacattacagtacagcctgatagaattgatctaaag
aaaaaatactctgaagaccatggtgaaataaggatggatgtgaaagcatgttttaaatat
actgcaaaccccagagatttaaatccaagaataaagatcagttacacgtttgaggtggag
aacgagaggcggcagctgggcctgccctccagggtgcgcttcagtgaccactcctctgat
cagttcactgcaagtacaaccctcaggggacagaactcgtgggagtgtgtgactacaaag
cttatactgcaggaaaaaataaaagataaactacgtcccattccaatatcagtcagcgtt
aaaattgctggcctggagtcaccatccaagagaagagagagtgtgcttccagatcttata
ccaattctaaattcaaacgaatctgaaacagagaccaccaaagtggagttcttaaaagaa
ggatgtggcgatgacaatgaatgtcacagcaatcttaagcttcagtaccggttttgtaca
agagacggaaatgaagacaggtttacttatttaccacttgaaaatggcgtgccagtgctc
gttctgagagaccagaaagatattgccctggaaataacagtgacgaacaatccatctgat
gtaaaaaatccacagaaagatggtgaagatgcatatgaagctaaactaattgcaactttt
ccagacagtttgacatactctgcattcagagagatgagggcttatcctgaaaaacagcta
acgtgtggtgctaaccagaatggttctcaagcagagtgtgaacttggaaatcctttcaaa
agaaattctaatgtaaccttttatctggtcttaagtaccactaaaattaatattgataca
acagacttagccattaacctgaagctggaaacaacaagcactcaagttaatttgactcca
attacagccagtgctaaagtggttcttgaattgcttttatcactcactggagttgctaag
ccttctcaggtatattttggaggtaacatcatcggtgagagtgctatgaaatctgaagat
gatattggaaacctcatagagtttgaattcagagtgactaacttgggcagaccactgaaa
gcatttggtactgcttccctggacatccagtggccaaaagaaattagtagtggcaaatgg
ctgctttatttgatgaaaatagactccaaaggcttggaaaaagtctcctgtcaacctgag
aatgaaatcaacagtttgcatcttggggaatcccataactcaagaaggaagcgtgaagtt
gcagagaagcagattacagatagccaggcattttctttattctcagaaagaaaatacaag
accttgagctgcaatgtgaatgcacactgtgtggacataaagtgtcccctgaagggttta
gacagcaaggcatctattgtgctgcgttccagactgtggaacagtaccttcttagaggaa
tactcaaaaatgaactaccttgacattcttgttaaggcttctatcaatgttcctgttgca
gctaagaaagttaaactcacaaatgaagttgctcaggtgcgtgttactgtatttcctgaa
aaaacagtggccgtctatacaggagttccgtggtggatcattgcagtggctgtccttgct
ggaatactcatgcttgcactcttggtattcttactatggaagtgcgggttcttccggcgt
tccaggtacgaagacaatgtcccccgctatcacgctgtaagaattccaaaagaggagcga
cagataagagatgggaaaaaccaagaccctgagacaaagcagtggttcaccaaatggaat
gaaaatgaaagttattcttag
DBGET
integrated database retrieval system
