Cinclus cinclus (white-throated dipper): 134047679
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Entry
134047679 CDS
T10813
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134047679 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134047679 (NLGN1)
Membrane trafficking [BR:
ccic04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
134047679 (NLGN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
134047679
NCBI-ProteinID:
XP_062354984
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Position
10:5271219..5563821
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AA seq
863 aa
AA seq
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MAFPRSMWLNCVWRVTVVRLLHMGLNATFAFSILGFLLHAAAVSSQKLDDTNPVVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWADIKNTTQFAPVCPQN
IIEGRLPEVMLPVWFTNNLDVVSTYVQDQNEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKV
GCNMSDTVELVECLQKKPYRELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSEDGISASDFDFAVSNFVDNLYGYPEGKDILRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDNTFRPTRKNSVSVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcctttccaagatccatgtggctgaactgtgtatggagagtgacggtggtccgcctg
ctacacatgggattgaacgccacttttgctttttctatacttggatttttgcttcatgct
gcagctgtgtcctcccaaaaattggatgataccaacccagtggtgaccaccaactttggc
aagataagagggattaagaaggaacttaataatgaaatcttggggcctgttattcagttt
cttggggttccatacgctgcccctccaacaggggagcgccgcttccaacctcctgagcct
ccatctccctgggcagatatcaaaaacaccacccagtttgctccagtgtgtccccagaac
attatagaaggcaggttgcctgaagtcatgcttcccgtgtggtttactaataacttggat
gtagtttcaacctatgtgcaagatcagaacgaagactgcctctatttaaatatctatgtc
ccaaccgaggatgtcaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaatt
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagacattcgggacagtgggggacctaagcctgtgatggtgtatattcac
ggagggtcctacatggaaggcactggaaatttatatgatggcagtgttctagcaagttat
gggaatgtgatagtcatcacagtcaactatcgccttggggtacttggatttctgagcact
ggggaccaagcagcaaaaggaaactatggccttcttgatctaattcaagctttgcgatgg
actagtgaaaatattgggttctttggtggtgacccattgagaataactgtttttggatct
ggggcaggcggttcatgcgtcaatctgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaaagggcaatagctcaaagtggaacagctctc
tccagctgggcagttagctttcagcctgcaaaatatgccaggatgttggctacaaaagtt
ggttgcaatatgtcggacactgtggaactggtagaatgtctacagaagaagccttataga
gaacttgttgaccaggacatccaaccagcaagataccatatagcctttggaccagtaatc
gacggtgatgtgataccagacgaccctcagatcttgatggaacaaggagaattcctcaac
tatgacatcatgctgggagttaaccaaggggaagggttgaagtttgttgaaaacattgtg
gatagtgaagatggcatatcagccagtgattttgactttgcagtttctaattttgtcgat
aacttatacggataccccgaaggcaaagacatattgagggaaaccattaaatttatgtac
acagactgggcagaccggcacaaccccgagaccagaaggaaaacactgctggctttgttc
actgatcaccagtgggttgcaccagcagtggccactgcagatcttcattcaaattttgga
tcgcctacatatttctatgccttctaccatcattgccagacagatcaggtacctgcatgg
gcagatgcagcccatggagatgaggttccttacgtactaggaatccccatgattggtcct
actgaattatttccttgtaatttctcaaaaaatgatgtcatgctaagtgcagtggtgatg
acgtactggacaaactttgcaaaaactggtgacccaaatcaaccagtgccgcaagacaca
aaattcatccacacaaaaccaaatcgttttgaagaagtagcatggaccagatattctcag
aaagaccaactgtatcttcacattggattaaaaccacgagttaaagaacactatagggcc
aataaagtgaacctttggttggagctggtacctcatctgcacaatcttaacgacatttca
cagtatacctctaccacaactaaagtgccatcgactgataatactttcagacccacaagg
aaaaattctgtttcagttacttcagcctttcctacagccaaacaagatgatcccaaacaa
caaccaagccccttttcagtggatcaaagggactactcaacagaattgagcgttactatt
gcagtgggcgcatctttgctgttcctgaacattttggcttttgcagcgttgtactacaaa
aaggacaagcggagacatgatgttcacaggagatgtagcccacaacgtaccaccaccaat
gatctcacccatgcacaagaagaggagataatgtccctccaaatgaagcacactgacttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttaggaccgcctgtccccca
gactacacgctagctatgagaaggtctcctgatgatatccccttaatgacacccaacacc
atcacaatgatccccaacactataccagggattcagcccctacacacattcaacacattc
accggaggacagaacaatactctgccccatcctcatccccacccccattcacactcaaca
accagggtatag
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