Cinclus cinclus (white-throated dipper): 134047703
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Entry
134047703 CDS
T10813
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04148
Efferocytosis
Brite
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134047703 (VPS8)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134047703
NCBI-ProteinID:
XP_062355039
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Position
10:20125241..20191359
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AA seq
1395 aa
AA seq
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MAAALEPGEAEPCPEPPVHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNET
DDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRL
SLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFGKDQNQALRLCLGSTAV
GAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDD
PTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVDLRDHPLTQY
SLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGD
VVYFLLVKRDDSGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEEL
ETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQVFYLGTKSVHVM
TLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLTGDTSKRKAVIADRMVEILLH
YTDRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRMDLLFNQIYIKMSENSVAKGIF
LECLEPYILSDKLMGITAQVMKDLLLHFQDRNRLENLEACIVHMDITSLDIQQVVLLCWE
NCLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLSAGKSLTDEQVVMGNKLLVYISCCLAG
RAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEGSVDEEVYPYVRTLLHFDTREFLNVLALT
FEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTL
FDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYER
QLRYDKIIGCYLRDPLRKEEVFNYIHNILSMPGYSAEEKQLVWQKALDHIEELLVLSPGK
AADLAAIHFSEQIKSIISNLQDQFLLFQFLRSLLDPREGINQDLLHLPPCITEQFIELLC
QYSPGQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKL
LLLTQDDESSVEPSLVENIEDTLMKTIDLCQRNSHSLDQQQREALWFPLLEAMMSPQKSS
GSSQCPYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTF
NYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVF
SCGHLYHSLCLLSKECGVVTKGLMRWMCYKCNSSSKGGKLSENFSELKKGTAASLAQMSS
ESVLDPQQIQAFDQLCRLNRGTSRLALLTELARGSHGSGDKHGLLSVSHGDPATSSVFQN
ENFQLHLTPPPLAEE
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccctcgagccaggggaggccgagccgtgcccggagcctcccgtgcaccgg
ctgagcgtggcggagctcgaccgtgagctggactctcgcagcgagctgattgacgacaaa
gaatttgacattcctcaagttgatacccctccaacgctggagagcatattaaatgagact
gatgatgaagaagagtctttcattttggaggatccctttctcttgaacattgataacaca
gatacacactcctatgacacctcttcagtggccagctctgacagtggggacaggacacac
ctgaaaagaaagaaaaaactcccagattctctctcactccatggatcagtgatacggctc
tcactcctgaaaggaatttctgcccaaatagtgtctgcagcagacaaagtggatgctggc
ttgcccactgcaattgcagcatcaaatctgatagcagtggggacttcccatgggttagca
ctgatatttggtaaagatcagaaccaggctctccggctgtgtctgggcagcactgcggtt
ggggcccagtacggggccatctctgctctcagcatcaacaatgactgttccaggctgctc
tgtggctttgcaaaaggacagatcaccatgtgggatctggccagtgggaagctgctgcga
tcaataacagatgcccaccctccaggaacagccattttgcacatcaagtttacagatgat
ccaacacttgcaatttgtaatgacagcggaggctccgtgtttgaactgtcatttaagagg
gttatgggagtgaggacgtgcgagtctcggtgtctcttcagtggctccaagggggaagtt
tgctgtattgagccattacatgcaaaggttgatttgagagatcatcctctcacccagtat
tcactgctggccatggcctccctcactaagatcctggttattggcctgaaaccatctctg
aaagtgtggatgacctttccctatggccgtatggacccttcgagtgtccccctgctggcg
tggcactttgtggctgtgcagaactcagtgaaccccatgcttgccttctgtcgaggagac
gtcgtgtactttcttctggtcaagagggatgatagtggtgcaatacatgtcacaaagcag
aggcagcttcatctgcactatgatctcatcaactttacttggatcaactcgcggacagca
gtgctgctggacagtgtggagaagctgcatgtcatagaccgtcagactcaggaggagctg
gagaccatcgagatctcagaggttcagctggtctacaacagcagccacttcaagtctctg
gccacggggggcaatgtcagcgaggccttggcactggttggagagaaagcttgttaccag
tccatcagcagctgtggtggtcaggtcttttaccttggaactaagtctgttcatgtcatg
acactgagaagctggagagagagagttgaccaccttctgaaacaagaacgtctcacagat
gccctggctcttgcttggtccttttatgaaggtaaagcgaaggctgttgtaggcttgact
ggggacacgagcaagaggaaagcagtcattgctgacagaatggttgaaatccttctccat
tacactgatcggactctgaagaaatgtcctgaccaaggaaaaatccaggtgatggagcag
cactttcaggatgtggtgcctgtcatcgtggattactgtctgctgctgcagcgcatggat
ctattatttaaccagatatatatcaagatgagtgagaactctgtagccaaaggcatcttt
ctggagtgcttggagccatatatcttgagtgataagctgatgggaatcacagctcaagtg
atgaaagacttgctgcttcacttccaagacaggaacaggttggaaaacttggaagcctgc
attgtgcatatggatatcaccagtttagacatacagcaggtggttctcctgtgctgggaa
aactgcctgtacgatgccatgatctacgtctacaacagcgggatgaacgacttcatcagt
cccatggagaagctgttcaaagtcatcgctcctccactgagtgctggaaagtctctcaca
gatgagcaggtggtgatgggcaacaagctgcttgtgtatataagttgctgcttggcaggc
cgtgcatatccattgggtgatattcctgaagatctggtacctttggtgaaaaatcaggtg
tttgagtttctgatccggctgcactcagcagagggatccgtggatgaggaggtgtatccc
tatgttcggaccctgctgcacttcgacacacgggaattcctcaatgtgctggctctgact
tttgaagactttaagaatgataagcaagctgtggaatatcaacagagaattgtggacatt
cttctgaaagtcatggtggagaattctgacttcaccccatcacaggttggctgtctcttt
accttccttgcccggcagcttgccaagcccaacaacactttgtttgtcaacaggacactg
tttgaccaggtgctggagttcctgtgcagcccggatgatgactcccggcattccgagaga
cagcaggtccttttagagctgctccaggcgggagggatcgtgcagtttgaagagagccgc
cttatccaaatggcagagaaagctgagttctatcagatttgtgagttcatgtatgaacgg
caacttcgctatgacaaaatcatcggctgctacctacgggatcccctgaggaaggaagaa
gttttcaactacatccacaacatcctgtccatgcctggctacagtgctgaggagaagcag
ctggtgtggcagaaagctttggaccatatagaggagctgctggtgctgagcccaggtaaa
gcagctgacctggcagccattcacttcagtgagcagatcaagagcatcatctcaaacctg
caggaccagttcttgctgttccagttcctgaggagtctccttgatcccagagagggcatt
aatcaagacctgctgcacctcccaccctgtatcactgagcagttcatcgagctgctctgt
cagtacagcccaggccaggttttggagacactcaaagttctggaatactgcagactggag
gaaaccatccagataacccaaaaacatcagctccatgaggcttcttcgtatttactagag
aagaagggtgatatccatggtgccttcttggttatgcttgagcgattgcagagcaaattg
ctgctgcttactcaagatgatgaaagctcagttgaaccctccttggtagaaaatattgaa
gatactttaatgaaaacaattgatctttgccagaggaattcacatagtttagaccagcaa
cagcgagaggccctctggtttcccctccttgaggccatgatgtccccacagaaatcctct
ggttcatcacagtgtccatattctgaatctttgaagagtttgacaatgcaagtgctgaac
aacatggctgcatttattgctcttccctcaatcctgcagaggattctccaggatccagtt
tatggaaaagggaaacttggagaaattcaggggcttgtcctgggaatgctggacaccttt
aactatgaacaaacccttctagagacaaccacaagccttttaaaccacgatctccactgg
tccctgtgtaacctgagagcttctgtcaccagaggccttaccccaaagcaggattactgc
tgcatctgtctccagcagtacaaaagaaggcaagaaactgctgatgaaatcattgttttc
agctgtggccacttgtaccactcactgtgcctgctgagtaaggagtgtggggtggtcacc
aagggcctcatgaggtggatgtgctacaagtgcaactccagcagcaagggaggaaagctg
agtgagaacttctcagagctgaaaaaagggactgcagcatccctggcacagatgagttca
gagtctgtgttggatcctcagcaaatccaagcttttgaccagctctgccgactcaaccga
ggcacatcccgactggctctcctgacggagctggcacgcgggagccacggcagtggtgac
aagcacgggctgctcagtgtttcccacggggacccagccaccagcagcgtcttccagaat
gagaacttccagctgcacctgacgccccctccgctggctgaagagtag
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