Cinclus cinclus (white-throated dipper): 134047723
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Entry
134047723 CDS
T10813
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03272
Virion - Hepatitis viruses
ccic04382
Cornified envelope formation
ccic04514
Cell adhesion molecule (CAM) interaction
ccic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
134047723 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134047723 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134047723 (CLDN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134047723 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134047723 (CLDN1)
04147 Exosome [BR:
ccic04147
]
134047723 (CLDN1)
Cilium and associated proteins [BR:
ccic03037
]
Other cilia and associated proteins
Stereociliary proteins
134047723 (CLDN1)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
134047723 (CLDN1)
Exosomal proteins of colorectal cancer cells
134047723 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
CD20
OppC_N
DUF4134
Cytochrom_B_C
HlyIII
DUF998
Motif
Other DBs
NCBI-GeneID:
134047723
NCBI-ProteinID:
XP_062355072
LinkDB
All DBs
Position
10:complement(11082937..11092580)
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AA seq
211 aa
AA seq
DB search
MASGGLQLLGFVMAFLGWIGIIISTAMPQWKMASYAGDNIVTAQALYEGLWMSCAMQSTG
QIQCKVYDSLLKLESSLQATRALMVASILLGLVGVFVAVTGMKCMKCMEDDQVKKMRMAV
FGGVIFIISGLAALVATSWYGNRVARAFYDPFTPVNTRFEFGSALFIGWAASSLAILGGS
FLCCSCPRRETSYPPTRGYPKNASSTGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagggctgcagctcctgggcttcgtcatggccttcctcggctggatcggc
atcatcatcagcaccgccatgccccagtggaagatggcatcctacgcgggggacaacatc
gtcacggcccaggcgctctacgaggggctgtggatgtcgtgcgccatgcagagcacgggg
cagatccagtgcaaggtgtacgactcgcttctcaagctggagagcagtctgcaggccacg
agggctttgatggtggcttcaatactcctggggctcgttggagtgtttgttgctgtgaca
ggcatgaaatgcatgaagtgcatggaagatgaccaggtgaagaagatgaggatggctgtc
ttcggtggggtgatcttcatcatttcaggtctggcagcactggtggccacgtcgtggtat
ggcaacagagtggctcgggccttttatgaccctttcacccccgtcaacaccagatttgag
tttgggtcagctctcttcattggctgggcagcttcatctctggccatactggggggatcc
ttcctctgttgctcctgtccacggagagaaacttcatatccacccacccgaggctaccca
aaaaatgcctcatccacagggaaggattatgtataa
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