Cinclus cinclus (white-throated dipper): 134047762
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Entry
134047762 CDS
T10813
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134047762 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134047762 (DHX36)
03012 Translation factors [BR:
ccic03012
]
134047762 (DHX36)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134047762 (DHX36)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134047762 (DHX36)
Translation factors [BR:
ccic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134047762 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
134047762
NCBI-ProteinID:
XP_062355126
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All DBs
Position
10:complement(975307..990899)
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEQRRGWGRGRGRGRGDDGGSASAASSSAGGPGGRGRHPGHLKGREIGLWYARKQGQK
NREADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGSAPEQPPKVKS
DAEKAPVRQIPTWEKTSLDLDVEYLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFRE
KLPSYGMREELVKLINNHRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPEKMDRRVHWRKGFMHGHVSRPEKEEKEEMYREQWPA
YLRQLQGRYSASTINALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLH
EILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVTLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR
KELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHL
LAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIENPHPVDWDDTKSRDTAVLTAIID
LITTQENEAVRNFAPRFQGERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcggcggggctggggccgcgggcgcggccggggccgtggcgacgat
ggcggctctgcctccgccgcctcgtcctcggcgggcgggcccggcgggcggggacggcac
cccgggcacctgaagggccgcgagatcgggctgtggtacgcccgcaagcagggccagaag
aaccgggaggcggaccggcagcagagagctgtggtgcgcatggacgagcgcagggaagaa
caaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaagccatg
tcctggtggtccggggatgaagaaggctctgctccagaacagcctcccaaagtgaaatct
gatgctgaaaaagctcctgtaagacagataccaacctgggaaaaaacatccctggatttg
gatgtggaatatctctgtgagaaaactgagcaggatgctgatttagatgaacaacttaaa
gaagacttaatgaagaagagatctgatcccagatatattgaaatgcagagattccgagag
aagctgccctcgtacgggatgagagaggagctggtgaagctgatcaataaccaccgagtg
acggtgatcagcggcgagacgggctgcggcaagaccacgcaggtcacacagttcatcctg
gacgatcacatcgagcggggcctgggctccacctgcaggatcgtgtgcacccagccccgc
cgcatcagcgctatctccgtggctgagagagtggctgctgagagggcagagggctgtggc
aatggcaggagcacaggctaccagatccgcctgcagagtcggttgccgaggaaacaaggt
tcaattttgtactgtaccacaggaattgtcctgcagtggctccagtcagataaacacttg
tccagcatcagtcatgtagttcttgacgaaatccatgaaagaaatcttcagtcagatgtt
ctaatgagcattattaaagatcttctgaatgttcgactggatctgaaagtcatactgatg
agtgctaccttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcac
atccctgggttcactttcccagtggtggaatatctgctcgaagatgtcattgagaagttg
aggtacaccccagaaaagatggaccgtcgggtgcactggaggaagggcttcatgcatggc
cacgtgagcaggccagagaaggaggagaaggaggagatgtacagggagcagtggccagcc
tacctaaggcagctgcagggcaggtactcagcaagtaccatcaatgccctggaaatgatg
gatgatgacaaggtggacctggaccttgtggcagcactgatcagacacatcgtgctggaa
gaggaggatggtgcaattctggtgtttctgccaggctgggataacatcagcactttgcat
gagatcttgatgtctcaagtcatgtttaagtcagataggtttattatcatacctttgcat
tcactgatgcctactgttaaccagactcaggtgttcaagaagaccccaccaggagtgagg
aaaatcgtgattgcaaccaacattgcagagaccagcatcacaatcgatgacgtcgtgttc
gttatagatggggggaaaatcaaggagactcactttgacacccagaacaacatcagcacc
atggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaaga
gttcagccaggccactgttaccatctgtacaatggactccgtgccagccttctggatgat
tatcagttaccagagatcctgaggacacccttggaagaactctgcttacaaatcaagatc
ctgaagcttggtggaattgcctattttctgagcaagctgatggaccccccgtctcgtgat
gctgtgacattggccataaatcacctcatggagctgaacgctctggacaggcaggaggag
ctgactcccctgggtgtgcacctggcacggctgcctgtggagccacacattgggaagatg
atcctgtttggagccttgttctgctgcctggaccccgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaagatcgcagatgcaaggaga
aaggagctgtcaaagaactcaaaaagcgaccatctgactgtggtgaatgctttcactggc
tgggaagaggctcggagttgtggtttcaggaatgagaaggactattgctgggaatatttc
ctgtcctcaaataccatgcagatgctgcataacatgaaagggcagtttgctgagcatctc
cttgcagctggatttgtgaacagcagaaaccccaaggatcccaaatctaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaaaaagaggaaaatggtgaaagtttgcaccaagacagatgga
tcagttaatatccatcccaaatcagtgaatgtggaggaaacggagttccattataactgg
ctcgtgtaccatttgaagatgaggaccagcagcatttacctgtatgattgtacagaagtg
tctccatactgcctcttgttctttggaggggatatatccattcagaaggacaaggaccag
gacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagcaaacttg
gtcaagaaactgagacaagaacttgacgatctcctccaagaaaaaatagaaaacccgcat
ccggtggactgggatgacacgaaaagcagggacacagcagtgctgacagccattatagac
ttgatcaccacgcaggagaacgaggccgtcaggaacttcgcgccgcggttccagggcgag
cgctacagctga
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