Cinclus cinclus (white-throated dipper): 134047871
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Entry
134047871 CDS
T10813
Symbol
CLDN18
Name
(RefSeq) claudin-18 isoform X1
KO
K06087
claudin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03272
Virion - Hepatitis viruses
ccic04382
Cornified envelope formation
ccic04514
Cell adhesion molecule (CAM) interaction
ccic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
134047871 (CLDN18)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134047871 (CLDN18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134047871 (CLDN18)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134047871 (CLDN18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134047871 (CLDN18)
04147 Exosome [BR:
ccic04147
]
134047871 (CLDN18)
Cilium and associated proteins [BR:
ccic03037
]
Other cilia and associated proteins
Stereociliary proteins
134047871 (CLDN18)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
134047871 (CLDN18)
Exosomal proteins of colorectal cancer cells
134047871 (CLDN18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
DUF308
QcrA_N
Motif
Other DBs
NCBI-GeneID:
134047871
NCBI-ProteinID:
XP_062355318
LinkDB
All DBs
Position
10:complement(20922708..20938523)
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AA seq
259 aa
AA seq
DB search
MSTTICQVMGFLVSSLGVGGSIMATAMDTWSTQDLYDNPVTAVFQYQGLWRSCVRQSSGF
TECRPYFTILGLPAMFQAVRALMIVGIVLGILGLFVCIFALKCIRIGSMEDTAKANMTLT
SGIMFIIAGLCAITGVSVFANMLVTNFWMSTTNMYQGMQNVQNRYTFGSALFVGWVAGGL
ALVGGIMMCLACKGLIPEESRYKAVSYNASGRNISYRTGPYKAGSGYEADPKTRKGMGYE
EAPRSEDGRRPYPSKYDYV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatctgccaggtgatggggttcctcgtgtcatcgctgggcgttgggggg
agcatcatggccacagccatggacacgtggagcacgcaggacctgtatgacaacccggtc
acggccgtcttccagtaccaggggctgtggaggagctgcgtgcggcagagctccggcttc
acggagtgtcggccgtatttcactatccttgggctgccagcgatgttccaggctgtgagg
gctctcatgatcgtggggattgtcctgggaatccttggcctctttgtgtgcatttttgct
ctgaaatgcatccggattgggagcatggaggacactgccaaagccaacatgaccctgacc
tctggcatcatgttcatcattgctggcctgtgtgccatcactggcgtgtccgtgtttgcc
aacatgctggtcacaaacttctggatgtccaccaccaacatgtaccagggaatgcagaac
gtccagaacaggtacacctttggctcagccctctttgtcggatgggtagcggggggcctg
gccctcgtgggaggcatcatgatgtgccttgcttgtaaagggctcatcccagaagaatcc
cgctacaaagccgtgtcctacaacgcctcgggccggaacatctcctacaggacagggccc
tacaaggctggctcggggtatgaagctgacccaaagaccaggaagggcatgggatatgaa
gaagctcctcgaagtgaggatgggagacgtccgtacccttcgaaatacgactatgtctag
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