Cinclus cinclus (white-throated dipper): 134047940
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Entry
134047940 CDS
T10813
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04136
Autophagy - other
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134047940 (ATG4B)
04136 Autophagy - other
134047940 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccic01002
]
134047940 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134047940 (ATG4B)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134047940 (ATG4B)
Peptidases and inhibitors [BR:
ccic01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
134047940 (ATG4B)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134047940 (ATG4B)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134047940 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
134047940
NCBI-ProteinID:
XP_062355405
LinkDB
All DBs
Position
10:complement(21676713..21696072)
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AA seq
412 aa
AA seq
DB search
MDAATLTYDSLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKKQMDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSSVLCSGAAACPALESDVLSNGCPEDVGLRERLGLWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDSGCLPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIKKVCVCRSGQTLEQAAQGSDGVPI
LGSVQMACGCGMWGHGLVIWAVLAEWLNSKILELFSNFNESLIFYPWKRSFR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactcttacctacgactccctcaggtttgagtatgaagactttcctgag
accaaagaaccagtttggatccttggccggaaatacagtgtttttacagagaaagaggag
atcctgttggatgtgacctcacggctttggttcacctacagaaaaaacttccctgctatt
ggaggaaccggtcccacctctgacacaggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaagcagatggataattacttcaacgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggagtcggggaaggaaaatccataggccag
tggtacggaccgaacacggtcgcgcaggtgctcaaaaaacttgcaacttttgatacgtgg
agctccctggcagtacacatagccatggacaacacagtggtgatggaagaaatccggagg
ttgtgccagtccagtgtgctgtgttctggagctgcagcatgccctgccctggagtcagac
gtgctctctaatgggtgcccagaggatgtggggctcagagagaggctcggcctgtggaaa
ccactggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctatata
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgattggagggaagcca
aacagtgctcactacttcattggctatgtaggtgaggagctcatttacctggatccccac
accacacagccagcagtggagcccagtgacagcgggtgcctccccgacgagagcttccac
tgccagcaccctccgtgcaggatgagcatcgccgagcttgacccctccattgccgtgggc
tttttctgcaacacagaggcagactttaatgactggtgccagcaaatcaaaaaggtttgt
gtttgtagatctggtcagacattggaacaggctgcccagggaagtgatggagtccccatc
ctgggaagtgttcaaatggcatgtggatgtggcatgtggggacatggtttagtgatatgg
gcagtgctggcagaatggttgaactcaaagatcttggagttattttccaactttaatgag
tctctgattttctatccctggaaaaggagtttcaggtag
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