KEGG   Cinclus cinclus (white-throated dipper): 134047962
Entry
134047962         CDS       T10813                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    134047962 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccic03019]
    134047962 (WDR33)
Messenger RNA biogenesis [BR:ccic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     134047962 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Collagen Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 134047962
NCBI-ProteinID: XP_062355445
LinkDB
Position
10:complement(22431717..22499676)
AA seq 1322 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWSDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGR
DHGARGRGRGAPRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPAN
RERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPKS
GRSSSLDGDHHDGFHRDEGFGGGPGGVNNPSRGGRSGSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccacggagatcggctcccccccgcggttcttccacatgccgcgcttccagcaccag
gcgccgcggcagctcttctacaagcggccggacttcgcccagcagcaggccatgcagcag
ctcaccttcgacgggaaacgcatgaggaaagctgtcaacagaaagaccatagactacaat
ccttctgtcatcaagtatttggagaatagagtatggcagagagaccaacgagatatgcga
gcgatccagcctgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatccactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaacaaagggattggttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagt
cttgccacactgcatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccatctctgtaaactcttcgacatccggaacctg
aaggaagaacttcaggtcttcaggggccataagaaggaggccacagctgtggcctggcat
cctgttcacgaagggctctttgccagtggagggtctgatgggtccttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctgtgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatcttgagcccaacagc
ctggcagttattcctggaatgggaatacctgaacaattgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggactgggga
atggaggaagtgatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccgtatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaagatattaagctggaagagaaaaagaaatcg
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaaaattgagagacttgcacaaaagcaagctgagcaagtgcagccaccgccccca
ggaggatctctccatggacctcagcctttcccaggacaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaataggacctcaa
ggtccgttacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacatggacatcaagga
atgcagagacatccgggccctcatgggccaatggggcctccaggtccacagggtaatgct
ggcccccagggacacttgggaccacagggcctgcctgggtctcagactcatttaggacca
cagggcccacctggcccacaaggtcacttgggtcctcagggtccccctggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatctcaagggatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacctagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggtcctcaggagatgcggggccttcagggacccccgcctcaaggttcaatgcttgga
cccccacaagaaatgcgtgggccacctggtccccagggccagcagggacctccacaaggt
tccttggtggggcctcaaggaaacatgcaaggacctcagggacagccaaacccttcgagg
gggccacatccttcgcagggccctctgcccttccagcagcagaaaacacctctgttgggg
gatgggcctcgtccccccttcaatcaggatggacagaacccaggtcctcctcctctgata
ccaggcctggggcagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggt
cttaataaaggtgatgcccgtgggccgcccaaccatcacctgggcccgctgtcggacaga
cggcacgagcagaacagcggcggccccgagcacgggccagagaggggcctgttccgaggg
ggccaggactggagtgatggcagggacagcaggggcatgccggacagacggggacctcac
cccgacttccacgatgacttcgatcggccggacgacttccgtgatgatttccacccagac
aagagatttggccatcgattacgagagttcgaggggagaggaggcccaccgctgcaggat
gagaaatggagacgaggtggacctgggcctccctttcctcctgatcacagggaatttgaa
ggaggtggttccaaccgcgggcctcccggtgcttgggaaggacggagaccctcagatgac
agatatccgcgggatcctgaagatgcacgcttccgaggaaggcgagatgagagcttccga
agaggaggaccctcgagacatgagggtcggggacccaggggcagagatggctttcctggc
cctgaagattttgggccagatgatgcttttgactctccagatgaaaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctccaagaggagctcggaagggtttgctt
cctactccagatgaattcccacgctttgaaggagggagaaaaccagaatcctgggatgga
aacagagaaccaggtcctcgtccagaccaccctcctcatgatgggcactctccagccaac
agagaacgttcctcttcactccagggcatggacatggcctcactgccaccacggaaacgt
ccctggcacgatggaccgggaacctctgaccacagagacatggatgctccaggtggacct
ccagaggagaggggcaaaggacgaggaaattcaggaccttcacagagagcgccaaaatct
gggaggtccagttctttagatggagaccaccatgatggattccacagggatgaaggcttt
ggtggagggccaggaggagtcaataacccttctcgaggaggaaggagtggcagcaattgg
ggaagaggaaataacatgaactctggccagtcccggagaggaggatctcggggtggacga
ggccgatag

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