| Entry |
|
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| Symbol |
CTCF
|
|---|
| Name |
(RefSeq) transcriptional repressor CTCF isoform X1
|
|---|
| KO |
| K23195 | transcriptional repressor CTCF |
|
|---|
| Organism |
ccic Cinclus cinclus (white-throated dipper)
|
|---|
| Brite |
Transcription factors [BR:ccic03000]
Eukaryotic type
Zinc finger
Cys2His2 others
134048111 (CTCF)
Chromosome and associated proteins [BR:ccic03036]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134048111 (CTCF)
|
|---|
| SSDB |
|
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| Other DBs |
|
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| LinkDB |
|
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| Position |
11:7093996..7128690
|
|---|
| AA seq |
750 aa
MKRTNQSRQKCRSVKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPANQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
AEEEEEAQPAVVEAPNGDLTPEMILSMMDR |
|---|
| NT seq |
2253 nt +upstreamnt +downstreamnt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgacgctattgtggaggaatcagaaactttcattaag
ggaaaagagaggaaaacctatcaaagacgccgtgagggtgggcaagaggatgatgcttgt
catataccagcaaaccaagcagatggaagtgaagtggtgcaggatgtcagcagtggggtg
cagatggtgatgatggatcagctggatccaactcttcttcaaatgaagaccgaagtaatg
gaaggggcagtgcctcaggaaactgaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaactgcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagttgtgaaagtgggtgcaaatggtgaggtggagacactg
gaacaaggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtatatgattttgaagaggagcagcaggagggtttgttgtct
gaggttaatgcagaaaaggtggtgggcaatatgaagccaccaaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgagctgtgcagttacacttgtccacgtcgt
tccaacttggaccgccacatgaaaagccacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttccggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gccagtgtggaggttagcaaattgaaacgccacatccgttcgcacaccggagagcgcccg
ttccagtgcagcctgtgcagctatgccagcagagacacctacaaactgaagaggcacatg
aggacccactctggagagaagccatatgaatgttacatctgccacgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacaccgagaatgtggccaaattccac
tgccctcactgtgatactgttatagcgagaaagagtgacctgggtgtccacttgaggaag
cagcattcctacattgagcagggcaagaagtgtcgctactgtgacgctgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaatgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgccagaagcagctcctt
gacatgcacttcaagagataccacgatcccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaaaggcaaacgtggccga
aagagaaagatgcgttctaagaaagaagattcttctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgagccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggc
aaagctgccactcaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaatattatagttgaagtgaagaaagaacctgatgcagaaaca
gcagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga |
|---|
