Cinclus cinclus (white-throated dipper): 134048119
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Entry
134048119 CDS
T10813
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134048119 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccic01007
]
134048119 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccic03016
]
134048119 (KARS1)
Enzymes [BR:
ccic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
134048119 (KARS1)
Amino acid related enzymes [BR:
ccic01007
]
Aminoacyl-tRNA synthetase
Class II (A)
134048119 (KARS1)
Transfer RNA biogenesis [BR:
ccic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134048119 (KARS1)
Prokaryotic type
Other AARSs
134048119 (KARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
RcgA
Motif
Other DBs
NCBI-GeneID:
134048119
NCBI-ProteinID:
XP_062355696
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All DBs
Position
11
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AA seq
595 aa
AA seq
DB search
MLSPGAARLRSWFWRAAPALRWQQALHDRSSELKRRLKAERKTAEKEAKQKEQSEKHSNK
PSLTSEDNVGTDEESLDPNQYYKIRSHAVRQLKGSSEDPYPHKFHVDLSLSDFIDKYSHL
QPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEDYFHVNSK
LRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLI
LNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLY
MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVHDLEKVLGVKFPSTECFE
TEETRRFFDNLCAARNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKW
HRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCT
ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSKKEGQPAEGTSV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccctggcgctgcgcggctccgcagctggttctggagggccgcgcccgcgctc
cgatggcagcaggcacttcatgaccgaagcagtgagctgaagagacgtttaaaggctgag
cgaaaaacagctgaaaaggaagcaaagcagaaagagcaaagtgaaaagcattcaaataag
ccttccttgacttctgaggataatgttggtactgatgaagagagcttggatccaaatcaa
tactacaagatccgtagccatgcagtccgacagcttaagggctccagtgaagatccctat
ccccacaagttccatgttgacttatctctctcagattttatagacaagtacagtcacctg
cagccaggagatcacctgacaaacattacagtgagagtggcaggtcgaatccatgcaaag
cgtgctgctggagggaaactgattttctatgatcttcgtggtgaaggagtcaagttgcag
gtcatggcaaattccagcctctacaaatctgaggaagactatttccatgttaacagcaag
ctgcgtcgtggagacattattggtgtagaggggaatcctgggaaaacaaggaaaggggaa
ctgagtattattccttatgaaatcactctcttgtctccatgcttgcacatgttgcctcat
cttcattttggcctcaaagataaggaaaccagatatcgtcagagatacttggatttaatt
cttaatgattatgtgaggcagaaatttataacccgtgcaaagatcataacttaccttcgt
agcttcctagatgagttgggctttcttgaggttgaaactcctatgatgaatgtaattcca
ggcggcgctgtggcaaaaccatttatcacataccacaatgaactggatatgaatttatat
atgagaattgctccagaactttaccataagatgttggtggttggtggtttggacagagtg
tatgaaattgggcgtcagttccggaatgaaggaatagatttgactcacaaccctgagttc
acaacttgtgaattttatatggcttatgcagactaccatgacttaatggaaattacagag
aagttgctttcagggatggtgaaacacattactgggagttacaagatcacttaccatcca
gatggtcaagatggacaggcttatgagatagattttactcctcccttccggcgaattagc
atggtgcatgatctggaaaaggtcctaggagtgaagtttccgtcaactgagtgttttgaa
actgaagaaactcgcaggttctttgataacctttgtgcggcgagaaatgttgaatgtccg
cctcccaggacaacagccaggctacttgacaaattagttggtgaattcctggaagtcacc
tgtatcaaccctacattcatctgtgatcacccacaggtcatgagcccgcttgccaaatgg
catcgctctcttccgggcctaacagaacgctttgaactctttgttatgaagaaggaagtg
tgcaatgcatacacagaacttaatgatcctttccgacagcgtcagctttttgaggatcag
gctaaggcaaaagctgcaggtgatgatgaagccatgtttattgatgaaaacttctgcacc
gcactggagtacggtcttcctcctacagctggctggggcatgggaattgatcgcttaacc
atgttccttacagattccaataacatcaaggaggtgcttctcttccccgccatgaaaccg
gaggatagcaagaaggaggggcagcccgccgagggcacctctgtgtga
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