Cinclus cinclus (white-throated dipper): 134048129
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Entry
134048129 CDS
T10813
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134048129 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134048129 (EXOSC6)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134048129 (EXOSC6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134048129
NCBI-ProteinID:
XP_062355710
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All DBs
Position
11:7194829..7196339
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AA seq
277 aa
AA seq
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MPLDHRRLRGPEESQPPTLWAATAAEDDEEEGAGAAPRDPCALRPLFARAGLLSQAQGSA
YVELGSGTKVLCAAWGPREAAEPGPGRLLCEFRRAPFAGRGARGRPGAAAEREAEREAAA
ALREALEPAVRLGRYPRARLAVSALLLQDGGSALAAAVSAAALALADAGVEMYDLAVGCA
LSRPPAPAASWMLQPAEPEERRAAARLTLALLPALNQVSAVLGGGRGGPPEDWAQALRLG
LDGCHRQYPVLRQSLLRAAQRRDAAAAATTAASATSA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggatcaccgccgcctgcgcggcccggaggagtcgcagccgccgacgctgtgg
gcagcgaccgcggccgaggatgatgaggaggagggcgcgggggcggcgccgcgggacccc
tgcgccctgcggccgctgttcgcgcgggccgggctgctgagccaggcgcagggttcggcc
tacgtggagctgggcagcggcaccaaggtgctctgcgccgcctggggcccgcgggaggcg
gccgagcccgggccgggccggctgctctgcgagttccgccgggcgccgttcgcggggcgc
ggggcgcggggccggccgggagcggcggcggaacgggaggcggagcgggaggcggcggcg
gcgctgcgggaggcgctggagccggcggtgcggctgggccgctacccgcgggctcggctg
gccgtcagcgcgctgctgctgcaggacgggggctcggcgctggccgctgccgtcagcgcc
gccgccctggcgctggcggacgcgggagtggagatgtacgatctggccgtgggctgcgcg
ctgagccggccgcccgctcccgccgcctcatggatgctgcagcccgccgagcccgaggag
cgccgcgccgccgctcgcctcacgctggccctgctgcccgccctcaaccaggtgtcggcc
gtgctgggcggcggccggggcggcccgcccgaggactgggcgcaagccctgcggctcggg
ctcgatggctgccaccggcagtacccggtgctgcggcagagcctgctgcgggccgcccag
cgccgcgatgctgccgccgctgccaccaccgccgcctccgccaccagtgcctga
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