Cinclus cinclus (white-throated dipper): 134048211
Help
Entry
134048211 CDS
T10813
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134048211 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
134048211 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134048211
NCBI-ProteinID:
XP_062355824
LinkDB
All DBs
Position
11:6892138..6925833
Genome browser
AA seq
1402 aa
AA seq
DB search
MASCSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPLGSGDGPAL
AKPVHRSISLGALQEKQVICLSGDDSSTCLVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTFRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPDIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSSDIFGSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDSLSVEGAQGSGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTSASMPSHGSH
EEFAFPDHMADMSTEGLGSEKESVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRASEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAVAPAGLPGEVLEPGHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
AQRLPVKDWKVKASPRASPKLKRKGKKDDGDMNQSPRSLNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLDRVLMEGQQRSGQL
QEHLSQQLSQSLSTAVCNRLERTVREEMKKTVPQCISKSMDPTVSQLSNTIAAKLTAVEG
TLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLEAHLKNKKVREQEVRDPLLNQLRQLISTFQSTTEQLASTIAASVHAE
VQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHM
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLTYLEDAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHN
PLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgctccagcatcgacatcgaggacgccacccagcacctgcgggacatcctc
aagctggaccggccgggaggttcggtgaatgagaaccagagaccgtcgaattcctataac
ggggacctgaatgggctgctggtgcctgatccccttgggagtggagatggacctgctttg
gccaagccagtgcatcgcagcatctctctaggagccctccaggaaaaacaagtcatctgc
ctttctggtgacgacagttccacatgcttagttatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagaggaagtaacaaggtgaaaatacag
cccgttgctagatatgactgggagcagaaatactattatggcaatctgatagctgtttca
aattcttacctggcttatgccattagagctgccagcaatggttctgctatggtgcgggtg
ttgagtgtcagcactgctgagcggacgttgctgaagggattcacaggaggagtggcagac
ctggcctttgctcacctcaactccaaccagctggcctgcctggacgaggctggcaacctt
tttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcttggttaacatc
aagcgacctgacaataccccactgaacaccttccgaagaatcatctggtgccctttcatc
ccggacgataacgaggagagcggggaagaggggagtcagacattggcattgctgcatgag
gacagggcagaggtgtgggatttggacatcatccgaaccaacaacagctcctggccagtg
gaagtgcctgatatcaaagaaggtttcattgtggtgaaaggccacagcacgtgcctgagc
gagggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgta
aaattctggcagatctatattgagggacaggatgagccaaggtgtcttcatgagtggaaa
ccccatgatggtagacctctttcctgcctgctcttttgtgacaaccataaaaagcaagac
ccagaagttcccttctggaggtttctcatcacaggagccgatcagaacagagaactgaag
atgtggtgcacggtgtcttggacctgtttgcagactgttcgcttttcttctgacatcttt
ggttccatgagtattcttcccagcctgaaagtctgcctggacctctcggctgaatatctg
atactgagtgacgtgcagagaaaagtcttgtatgtgatggagttgatgcagaaccaagag
gagggcaaagcttacttcagctccatctcggaattcctccttacccacccagtgctgagc
tttggcatccaggccgtgagccgctgccggctacggcacaccgaggtgctcccagcagaa
gaggaaaatgacagcttgagtgtagaaggtgctcagggctctggggctgttgaatcagca
gcaggtgtgctgataaaactcttctgtgttcacaccaaggccctacaggatgtgcagatt
agattccagcctcttcatagccctgacacaagtgcttccatgccttcccatggctctcat
gaggagtttgcctttccagaccatatggctgatatgagcacagaggggctgggatctgaa
aaggagtctgtgcacggctcccagccagacctgcggcgtatcgctgatctgcctgtgcca
gcagacttcctttctctctccaatgatgccaaacccaagctgatgactccagatgcattc
atgacaccaagtacttctcttcaacagatcgctgtctctccaggcagcagtgtcagttcc
ctgactgcagtcacagccatgagcagtacttctgtcacggatgcctctttgcccagagca
tcagaagacttgactgtcagccccaagatgcagctggacaccagcctcacgctgagcagc
agcagcagcagcctccagaccagtcctaggagtcactctgttcttatcccaggcctccct
gacaagctgacaccaaaggcacctgttccagttgcaccaggaaactcctctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgctcc
ccagatgtcatttcctctgcttccacagccatgtcccaggatatcccagagattgcttct
gagaccttgcagcgcagctttgcagtggctccagctgggctccctggggaggtgctggag
cctgggcaccatgcagacagtatggcctcagctgcctcagccctgcacttgctgtctccc
aggaaccgccacaactctgagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccatcattactggagactgctttaactcaggaaaatgcatcttct
gacagtgttgtgagtcagccatggccagcggctcctgacataacccgggaaaccaggaac
agcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctaccat
cgacacagctaccaccttctgcagcatgacagccaggatgccagtgcagaacaaagtgat
cacgatgatgaagttgcaagcttggcttctacgtcaggtggatttggtgccaaagcatct
gcgcagaggctgcctgtgaaggactggaaagtcaaggcatccccccgggcttccccaaag
ctaaagcggaagggcaagaaagatgatggggatatgaaccagtcaccaagatcattgaac
aaccaggtgacaccagagttccaggatgagctgatgtgcatcctgaggagccagcagcgg
gaactctccgagctgcggcagaaccagatggagctgctgcagagactcacggatcacctc
gatgccatccagagctccctcatgggccacatggagagagtgatcgactcccagcaggag
caggagcagagaaggctggaccgggtgctgatggaagggcagcagcgcagtgggcagctc
caggagcacctttcccagcagctctcccagtccctgtccacagctgtgtgtaaccgtctg
gagaggaccgttcgggaggagatgaagaaaacagtgccccagtgcatttccaagagcatg
gaccctactgtcagccagctcagtaatactattgctgccaagctcactgctgttgagggg
acactgaaagagaatattaccaagctagtgaaatcaaagaaccttacagacagtgttgtg
agggccacagctgacactctgcagggacccatccagtcagcctacagggaggccttccag
agcgtcgtgctgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgat
accttcaagcagggcacacaggaatatatccagcagctggaggctcacttgaagaacaag
aaggtacgagagcaggaggtgcgggacccgctgctgaaccagcttcggcagctcatcagc
accttccagagcaccacggagcagctggcatccaccattgcagccagtgtccatgctgag
gtgcagcaccagctgcacatcatcgtgggcaacatgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacc
tcgagcattgtccaggcaatgcgctcagcagctgggacacccatcccctctactcacatg
gatttccagtcccaacagactcacatccttcaactgctccagcagggacacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaacctggttctatatgtctgtgaaact
gtggatactcagcaagtatttggacagcatccatgcccactgtctcagcctgtgctgctc
tccctcattcagcagctctcctcagatctgggcactcgtacagaactgaagttgacctac
ttggaggatgcagtgatgcacctggaccaaagtgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcaaaagctcttccagttcctccaggtggaaccccacaac
cctctgagcaaacccgcgcgtcgcctcatgatcatgctccagggcttggtcacccctggc
atgacctag
DBGET
integrated database retrieval system
