Cinclus cinclus (white-throated dipper): 134048253
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Entry
134048253 CDS
T10813
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134048253 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134048253 (NUP93)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134048253 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
134048253
NCBI-ProteinID:
XP_062355903
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Position
11:complement(8142874..8214685)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSKGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQESEPSYVGEVGPPGRSSLDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVKHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLSAAMHVVKRAQHQLGEFKTWFQEYMHSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGTSAPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKASGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaaggctttggagagctgctgcagcaggcagagcagctggcagctgagaca
gaagggatctcggagctccctcacgtggaacgcaacctgcaggagatccagcaggccggg
gagcgcctgcgctcccgcaccctgacccgcacctcccaggagactgcggacgtgaaggca
tcagttcttcttgggtctaaagggcttgatatatcccacatttctcagagacttgagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctgtctgccattgaagagtctaggaggagg
acttttgccatggctgaggagtatcaccgagaatccatgctggttgaatgggaacaggtg
aaacaaaggattcttcattctctgcttgcatcaggggaagatgctcttgatttcacccag
gaaagtgagcccagctatgttggtgaggttggtcctccaggtcgcagctctttggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctttgtgctgcaactgcaggcctggatgataagaacatc
tccgagatgtgggccatggtgaaacaaatgactgatgtcaccctggttcctgccagtgat
gccctgaaagtccggaccaacatggaggtgcgcatggagttcgtgaagcatgctctgcac
tacctggaggaaagttacaaaaattacacttttgtgacagtctttggaaacttacaccag
gctcaactgggtggagtcccaggcacctaccagctggtccgcagcttcttgaacatcaaa
ctcccagcgtctgtccctggtctgcaggatggagaggtggagggccatcctgtgtgggca
ctgatttactactgcatgcgctgcggagatctgagtgcagccatgcacgtggtgaaacgg
gcacagcaccagctgggagagttcaaaacctggttccaggagtacatgcacagtaaagac
agaagactgtctcctgctacagaaaataaactgcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgtattattggccgttgtgacattaca
gacaatcagagtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgatggtggcacgagcgccccacaggaccggcttacgctatcacagttc
cagaagcagctgctggaagactatggtgaatcacattttgcagtgaaccagccacctttc
ctctacttccaagtgttgttcttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgtcacgctgttcacgttgctttagtcctgtttgagttaaaa
ttgcttctgaaagcatctggacagagtgctcagctattaagccatgaagctggtgaccct
cctggtgtcagacgtttaaattttgtgcggcttttgatgctttacacccgtaagtttgaa
tcaacagatccaagggaagctctgcaatacttttactttctcaggaacgagaaggacagc
caaggagagaacatgttcttgcgttgcgttagtgaaatagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaaggatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagagaataaagga
ttgtttgaagaggctgcaaaactttatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccagttgttccccagatcagcactccccagtcaaacaag
gagcggttgaagaacatggctcattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccatcgactccacattctaccttctgctggacttaatcacattttttgat
gaatatcactctggtcacatcgacagggcctttgatattattgaacgcctgaagcttgta
cctctcagccaagattgcgtcaaggagagagtcgctgccttccggaatttcagtgatgaa
atcaaacacaatttatctgaggtcctgcttgcaaccatgaatattttattcaccaagtat
aagaggatgaaaggcacaagcccaaccactcctgccagaccccagcgggtaatggaagac
agagattcgcaacttcagtctcaagctcgtgcactgataatgtttgctgggatgatccca
tacagaacatcgggagacacgaacgcaagactggtgcaaatggagattcttatgaattag
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