Cinclus cinclus (white-throated dipper): 134048279
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Entry
134048279 CDS
T10813
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134048279 (RFWD3)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134048279 (RFWD3)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134048279 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR5
zf-RING_UBOX
zf-rbx1
WDR55
Beta-prop_THOC3
Beta-prop_WDR3_1st
zf-RING_5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
CFAP43_N
zf-UDP
Rtf2
zf-RING_11
zf-C3HC4_4
WD40_2
Beta-prop_RIG_2nd
zf-ANAPC11
Nairovirus_Gn
zf-RING_Vps41
Beta-prop_EML
WD40_Prp19
Beta-prop_RSE1_2nd
DUF7837
Beta-prop_EIPR1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
134048279
NCBI-ProteinID:
XP_062355949
LinkDB
All DBs
Position
11:complement(7922667..7943249)
Genome browser
AA seq
751 aa
AA seq
DB search
MAQEEMEVDLHPVAGYSVETLQTLAPEPSGHTALSHIPVLGEGGGDSTAALPADRDAVVT
PNAGITGEAAAEPELQMNPATAPSGLQRLQEALDLYQQPVPQLTQRPQVRRARRQQRIGG
SQRTISARAALDHYFQLSRTQEPSAGPAPHLEFPRMARDTQEQQPDEIIEVSDSDSSTSE
EEEEEEEEAVEAAAPLLPSAQETPPTASSGVSSQVQAEPPQASAEHESLEDEAEVQQKQT
AQQKKLELSVPAAPLDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKGQA
GKCPQCNKKAKRSDIVVLYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQLQ
VLTDECSKLRKQVQELKALVAQYNVSTSQQAGSSRTCLPGSLPSSQSQRKYHLEKVFLVS
QTGNCRVMAYCDSLSCLVVSQPSPQSTFIPGCGVKMMSLANLKSSQYIPIHSKQIRSLAF
GTRADGLLLSAALDSTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNGSIM
IYDLRDTNSHVQELVPQKSRCPVVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNS
YRPHHLPLEPGGCIDLQTEINTRHCLATYRPGKNNPCVRCVMMELTCSPLAEGSEDVVCS
SNPVQTFSAGPTCKLLTKNAIFQSPEDDGSVFVCAGDEASNSALLWDAGSGSLLQKLPAD
LPVLDICPLEVNQSHLLATLTEKMVKIYKWQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaagttgatctccaccccgttgctggttactcagtggagact
ctccagacacttgccccggagccctctggtcacacagcgctctcccacattcctgtgctc
ggggaaggaggaggagacagcactgcagcccttcctgctgaccgtgatgctgttgtcaca
cccaatgctggtataacaggggaagcagctgcagagcctgagctgcagatgaatcctgcc
acggcccccagtgggttacagaggctacaagaggcattagatctgtaccagcagcctgtg
ccacagctcacacagcgtcctcaagtgaggagagctcgcaggcagcagagaattggtggt
tcccagaggaccatcagtgccagggcagcattggaccattactttcaactcagtaggacc
caagagccatctgcaggaccagctccacacctggagttcccccgtatggcaagggacacc
caggaacagcagccagacgagataattgaagtgagtgactctgacagcagcacttctgag
gaggaggaggaggaggaggaggaagcagtggaggcagcagcaccactgttaccatcagcc
caggagacgcctccaacagcgagctcaggagtttccagtcaggtgcaagcagagccacct
caagcttctgcagaacatgaaagtcttgaagatgaagctgaagtccagcaaaagcaaaca
gctcaacaaaagaaactggagctatcagttcctgctgcacctctggatgaggaggaagga
gatacctgtgcaatctgctttgagcagtggaccaatgctggggaccaccgtctgtctgcg
ctgcggtgtggacacctctttggctacacctgcattgagaggtggctcaagggacaggca
gggaagtgccctcagtgcaataagaaggccaagcgttctgacattgtggtcctgtatgcc
cgcacgctgaaggcgctggacaccagcgagcaggagcgcatgagaagttctttagaaaag
gagcaaatgttgcggagacaggcagagctggaatctgcacagagccgtctccagctccag
gttctgacagatgaatgcagcaaactccgcaagcaagttcaggagctgaaggctctggtg
gcccagtacaatgtgagcacttcacagcaagctggcagctcccgcacttgcctcccaggc
agcctcccctccagccaaagccagcgcaagtaccacttggaaaaggtttttttggtgtct
cagactgggaactgcagagtgatggcatactgtgactcactgagttgtcttgtggtatca
cagccttctccacagtctacttttattcctggttgtggtgttaagatgatgagcttggcc
aacctgaagagcagtcagtacatccccatccacagtaaacagattcgaagcctggctttt
ggcactcgagcagatggtttgctgctctctgctgccctggacagcactctcaaactcacc
agcttggcaacaaacactgtggtgcagacatacaatgctggccgtcctgtgtggagctgc
tgctggtgtcttgatgatacaaactatgtctatgctggattggtcaatggctctatcatg
atatatgatctgagagacacaaactctcatgtccaagaactggtccctcagaagtcaagg
tgccccgtggtatctctgtcctacctgccccggatggcctcagcgtcgctgccttatggt
ggaatattggctgggaccttggaaggagcctgcttttgggaacagaaagctggcaactcc
tatcgacctcatcacctgcccctggaacctggaggctgcattgatctccaaacagagatt
aacacacggcactgcctggccacctacaggcctggcaaaaataacccatgcgtgcgttgt
gtgatgatggaactgacttgcagcccactggcagagggctcagaagatgtggtgtgttct
tctaacccggttcagactttcagtgctgggcccacttgcaagttgctgaccaaaaatgcc
atttttcagagcccagaggatgatgggagtgtctttgtgtgtgctggtgatgaggcatcc
aattctgctttgctctgggatgctggaagtggttccttgctgcagaagctgccagctgac
ctgcctgttctggatatctgccccttggaagtgaaccaaagccacctcttggctactctg
acggagaagatggtgaaaatctacaagtggcagtga
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