Cinclus cinclus (white-throated dipper): 134048305
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Entry
134048305 CDS
T10813
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134048305 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccic03009
]
134048305 (UTP4)
Ribosome biogenesis [BR:
ccic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134048305 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
DUF7165
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Frtz
Motif
Other DBs
NCBI-GeneID:
134048305
NCBI-ProteinID:
XP_062355987
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Position
11:complement(999049..1003750)
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AA seq
686 aa
AA seq
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MGEFEVHRVRFFGLVPAGVRCLACHPRGPRLALARTDGAVEVYNFAANYFQEKVIPGHEL
RSVESLCWAVGDRLFGAGLSGEITEYDLSGLSAARGVDGGGGPIWSMAANGTGTQLAIGC
EDGSVKIFQVAPGGIQFERNLDRRKGRVLCLSWHPSDTHIVAGSIDFFRVIDVTSGQTVQ
RIMVNHHVEKAKCECVVWAIALLSSGTVVSADSFGRVQFWDWEQGTLAESHAVSTSAVLS
LAVSEKEDSIVVGTSTGATYQLQLLPVNLGGQEKRWVRTKPFQFHSHDVRAVAHSPTALI
SGGLDAQLVIRPLMEKIQKKGYDAALRKFTFPHRRLVSCARKARLLLFQFSQYLELWRLG
STEETGKDGEVLSLCRMPEHLVQLKSKGPEHIYCSCVSPCGTWVGYSTASRFQLYRVHCD
GDSVSLRKVPKVPKLLPPAYQLQFSADSSSLFVASARGSVHVFQLLEPGGCKHLHTLRPP
SGCSEAVYLLAPSADGHWLAAVSGDWAIHIYNLKCFKHHCMVPIYNCAVSALAIHPSTNN
LVIAYSDQQLLEFCIPEKQYTSWSRAVQTRGLHRAWLERDSPITHITFNPKNPSHILLHD
TYLLCVLDKSLPLPDDNTLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDENC
LVVVERPIMDFKTQLPLPVQQKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagttcgaggtgcaccgggtgcggttcttcgggctggtaccggcgggcgtgcgc
tgcctcgcctgccacccccgcgggccccgcctggccctggcccgcaccgacggcgccgtc
gaggtgtacaacttcgccgccaactacttccaggagaaggtgatccccgggcacgagttg
cggtcggtggagtcgctgtgctgggcggtcggggaccggctgttcggggccgggctcagc
ggggagatcaccgagtacgacctgtccgggctgagcgccgctcgcggtgtcgatggcggc
gggggacccatctggagcatggcggccaatggcaccggcacgcagctggcgatcggctgc
gaggacggctctgttaaaatcttccaagttgctcctggggggatccagtttgagcggaac
ctggacaggcggaaaggccgtgtcctgtgcctgtcctggcacccctcggacactcacatc
gtggctggctccatcgacttcttccgtgtgattgatgtcacttcaggccagacggtgcag
aggatcatggtgaaccaccacgtggagaaggccaagtgtgagtgcgtggtgtgggccatc
gccctcctctccagtggcaccgtggtcagtgctgactcctttgggagggtgcagttctgg
gactgggagcagggcacgctggcagagtcccacgctgtcagcacctcggctgtgctctcg
ctggccgtgtcagagaaggaggacagcatcgtcgtgggcacctcgaccggggccacctac
cagctgcagctgctgccagtgaatctgggtgggcaggagaaacgctgggtgcggacaaag
cccttccagttccacagccacgacgtgcgggccgtggcacacagccccaccgccctcatc
tccgggggcctggatgcccagctggtgatccgcccactgatggagaagatacagaagaag
ggctacgatgcagcgctccgaaaattcaccttcccccaccgacgcctcgtctcctgtgcc
aggaaagcccgactgctcctcttccagttctcccagtacctggagctctggagacttggc
tccactgaggagactggaaaggatggtgaggtcctttccttgtgccggatgcccgagcac
ctcgtgcagctcaagagcaagggcccggagcacatctactgcagctgcgtctcaccctgt
ggcacctgggttggctactccacggcctcccgcttccagctgtaccgcgtgcactgtgac
ggggacagcgtcagcctcaggaaggtccccaaagtgcccaagctgctgcctccagcctac
cagctccagttctccgccgactccagcagcctctttgttgcctccgctagaggatctgtc
catgtcttccagctgctggagccagggggctgcaaacacctgcacacactgcggccaccc
tcaggctgctctgaggctgtttacctgctggcaccgagcgcagatgggcactggctggca
gctgtcagtggcgactgggccatccacatctacaacctgaaatgcttcaagcatcactgc
atggtgcccatctacaactgcgccgtatcggcccttgccatccaccccagcaccaacaac
ctcgtcattgcctactcagaccagcagctgttggagttctgcatccctgagaagcagtac
acgagctggagccgtgccgtgcagacccgggggctgcaccgtgcctggctggagcgggac
tcgcccatcacacacatcaccttcaaccccaagaacccctcacacatcctgctccacgac
acctacctgctctgcgtccttgataagtccctgcccctgcctgatgacaacaccctcctg
atgaaccagagcaccctgaaacagctcccagagacggccaggaagcggcagctccatgcc
ttcaagatctgcaagaagttccagccactgctcttcatggatctgctggacgagaactgc
ctggttgtggtggaacggcccatcatggacttcaaaacccagctgcctctgcctgtccaa
cagaagaaatttggcacctga
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