Cinclus cinclus (white-throated dipper): 134048357
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Entry
134048357 CDS
T10813
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134048357
04091 Lectins [BR:
ccic04091
]
134048357
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134048357
Lectins [BR:
ccic04091
]
C-Type lectins
Others
134048357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
SUEL_Lectin
Ion_trans
GPS
PKD
AGA2
Motif
Other DBs
NCBI-GeneID:
134048357
NCBI-ProteinID:
XP_062356068
LinkDB
All DBs
Position
11:4726081..4761975
Genome browser
AA seq
2530 aa
AA seq
DB search
MLYCCCRGKQQRGRXNADDTTRMTSQAFEEGSKKSGALESKTSAMHGTELRMWLGVTVLF
FLAVCMAVEEAIDEGIPCSKYQQAFNHSCYEFVRFHRTFTGAQSWCEKGGGHLVFIPNED
TQEFLQKHIAEDQEWWIGLISNSLLNETTDGSITWLDTSNISYSNWYKDQPSPFSSTCGY
ILKNAKYQWGVTENCSQEFDFICEFESGQSIACDNYNATVQCRSGEVIEIEESFYGRKTP
HYCVSETPLQLETDEGCNWISVKDEVAGQCHSLQACQVAADGTFFGDPCPALGSYLSIQY
HCKEGLQLVMTDTCFVFENITVTLTWLLSPYSGNLSCTISTGDGHTIDPYYPLTLVSNLT
YMYSSPGEFTVFVECTTSEWHVMAQRQVTVQDKVDQLSITGCYSQYETGNSSHCRTLYGE
VLWIQVQLSGGNGVTYSMLADNVTLTESSAKEGLAPHNMTLSSASQELIGPGIHQLEIRA
SKNTKALEISEHIAVHLIEPVSGIQAAVASHTLQLGEDLEVNVSVSRGAPEKLMFEVVGP
NQTHWHKADGPRGEPWTYIVPVPSEGTFLVKVVAMNAFSNMSLDLGFITVLANSSHKKDS
AKEEGSYKTNTRKKNDHKIYIKPNRHVDPFTTVTLGWPDNNNNFSFLWTCGACWPAWKEC
VKQQIILINQSEVQIPPSCLPPPKSAVTVRVTVRNHGSEEGQDEQCLYVTAKKELQLEIR
CEANCKPVNVSDEVVLSVSGQEDSPAMYYNWYLDNAFQNKSTALPLACGLTGFQQNSLNL
LQSNTSMLRMTSSFLQTQGEAFQIKVTATTQRAFGEGSFLVSAVPPPEAPGCAVSPGHGS
VLTAFRVSCGAPGSEGSGRSSPGRRLTYCFYVTPNSLLDCSPDPELFPVYLPLGEKENNF
VLPVTIIVSNNFGETAQTNASVKVGPADMMDGNLTLQAVISEKANTILKDGNNSMSLFQL
YKSVTSVLNQQIQEESFNMSLQTNTQKELRGLMLTTLSVVNITSMQTALKMSEVLKEITY
RSEELSVSAQVEASNTLKYVSASLLAVNTEHSRDGQELKEAANYLFNAVSNVLKASVEIR
AGNISVPEAEQSSVSHQLLSTVENLQSALLFGKAPGDEPTVLTSPSATMYMHRLQTENMD
STSINISNSSSASFTLPPASSLNVSGVNGETVDIRMVSFAMNPFYSSDNSFDISGTVGGL
SLSGLDGLIIPVSNLKENIEIILPRLSAAQEDKILLNLGNYSTFQVNVTSENTSIVIYLE
SEHDIPLILYLGYGYLPNETNYDMKNHLLYKKTSGGETNSWVVSPEELIFGEGTYYFMVV
QDMGMDSTVYNGLSINATCFASRCVFWDEHQGGWSSYGCHVGPKTNPSSTQCLCNHLTFF
GSSFFVMPNAIDVSKTAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKI
TVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGESEPHHLNDPDTSVFERGG
VDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAIDIG
ECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFNRSPRSSFTRAQRVSCCFS
LLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNI
RPRPAQQGREKKPAKNGKKEKERNLPLSPGATQAASLTPEAVTKDIRRIANSLFKALKTS
SLTLAPDLEKSTNINTLLSLVEDIICQQNRARQGVYDETKKDGPITVTLGAMDIQEKTRS
PTPEERICNQLKYSNYHLCLYMQLQHVEMELKLLGPHKFQMPQSYTQAVCQVQHMKNLLE
NQICSSASITEGWSHTPNLSSDDKKSSSPRGLPWWFVFIAWFLVAATSSVSGFFTMLYGL
HYGKDNSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIYGPLSA
PGDSHPLFGVRRDSRSSIYWPPPAADVEKMKISCMKEQKAFGLIREILAYLGFLWMLLLV
AYGQRDPNSYYLNKHIEDSFTDGFHDVYSYQDFFTWANTTLLKNLYGSYKGFITDGNSKL
VGSARIRQVRVKGDTCPISPRLQHVVEECHAPYSLQTEDTTVYGEHWNTSVSDNSSDLSS
AWQYQSQSKLRGHPSWGKLAIYSGGGYVIHLGTDPKNASRILQYLFNNVWLDTFTRAVFV
EFTVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTDSLHIFVVAAEVIYFLFI
VYYMTVQGKLLKSLRWRYFHSKWNLLEMAIILISWTALSVFVKRTVLGTQDISYYQDHKE
GSISFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITV
ITIMFLAYSTAANLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGS
CIIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKVFSFFGIKCRKEEKPVT
GEQLEQPVSK
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgctctattgctgctgtcgtggcaagcagcaaagaggaaggnagaatgctgatgacaca
acaaggatgacatctcaagcttttgaagaaggcagcaaaaagagtggtgccctggagagc
aagacaagtgcgatgcatggcactgagctgagaatgtggctgggggtcacagttctgttt
tttcttgctgtgtgcatggctgtggaggaagcaattgatgaaggaataccttgttcaaag
taccagcaagctttcaaccattcatgctacgagtttgttagattccatcgaaccttcaca
ggtgcccagagctggtgtgagaaaggaggagggcaccttgtctttattccaaatgaggac
actcaagagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactgatc
tcaaactccttgctgaatgaaactactgatgggtcaataacttggctggacacttcaaat
ataagctacagtaactggtacaaggatcagccatctcccttctcatccacatgtgggtac
atcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaatttgac
ttcatttgtgagtttgaatctggccagagcattgcttgtgataattacaatgccactgta
cagtgtagatcaggagaagttattgaaattgaagagagcttctatgggcggaagacccct
cactactgtgtgtcagagactcctctccagttggaaacagatgaaggctgcaactggatc
agcgtcaaggatgaagtagcaggccagtgtcacagtctgcaggcctgccaggtggcagca
gatggcactttctttggagatccttgtccagctttgggaagctatttgtctattcaatac
cactgcaaggaaggtctgcagctggttatgacagacacatgttttgtctttgaaaatatc
acagtcactttgacctggctgctctctccgtactctgggaatctttcctgtaccattagc
actggagatggtcacactattgatccttactaccctctaacactggtcagcaaccttaca
tacatgtactcctctcctggggagtttactgtttttgtggagtgcaccacgagtgagtgg
catgtcatggcacagaggcaggtgactgttcaagataaggtggaccagctcagcattact
gggtgctacagccagtatgaaacagggaacagctcccactgccgtacactctatggggag
gtgttgtggatccaagttcagctcagtggaggcaatggagtaacctacagtatgttagca
gataacgtgacactgactgaatccagtgcaaaggaaggtcttgccccccataacatgaca
ctcagcagtgcctctcaagagctgataggcccagggatacatcagctggaaatccgagca
tccaagaacacgaaggcgttggagatctctgagcatattgctgttcatttaattgagcca
gtatctggaattcaggctgcagtagcttcccacactctgcagctgggggaggatttggaa
gtgaatgtctctgtgtcccgtggtgccccagagaagctgatgtttgaggtggttggaccc
aaccaaacccactggcacaaagcagatggccctcgtggggagccgtggacatacattgtg
cctgtgccctcggaaggtacttttctagtgaaagtggtggccatgaatgccttctcaaac
atgagtctggatcttggattcatcactgtgttggcaaacagttcccataaaaaagattct
gctaaggaagaaggcagctacaaaacaaatacccgaaagaaaaatgatcacaaaatatat
attaaaccgaatcgtcatgtggatcctttcacgactgttacacttggctggccagacaac
aacaataatttcagttttctctggacctgtggagcttgctggcctgcctggaaggaatgt
gtgaagcaacagataatcctaatcaaccaaagtgaggtgcaaatcccaccttcctgcctt
cctcctccaaaatcagcagtgactgtcagggttactgtccgaaaccatggcagtgaagag
gggcaggatgagcaatgtctctatgtgactgcaaaaaaagagctgcaactggaaatcagg
tgtgaggcaaactgcaagccagtgaatgttagtgatgaagttgttttgagtgtctctgga
caggaggactccccggccatgtattataactggtatttagataatgcattccaaaacaag
tctacagccctccctctagcctgtggcctgactggtttccagcagaactctttgaatttg
cttcagagcaacacatccatgttgagaatgaccagctccttcttgcagacacagggagaa
gcttttcagattaaagtaacagccacgactcagcgagccttcggggagggatcgttcctg
gtgagcgccgtgcccccgcccgaagcccccggctgtgccgtgagtcccgggcacggctcg
gtgctcaccgccttccgagtctcctgcggcgctcccggctccgagggctcgggccgctcc
agtcctggcaggcggctcacgtactgcttctatgtgacaccaaattctctcctggattgt
agcccagatcccgaactcttcccagtttatcttccacttggagaaaaggaaaataatttt
gttttacctgtgacaattatcgttagcaacaattttggtgaaacggctcaaacaaatgct
tcagtgaaggttggacctgcagatatgatggatgggaacctgaccctgcaggctgtgata
tctgagaaggcaaacaccatcctaaaagatgggaacaacagcatgagtctcttccagctg
tacaagtcagtgacatctgtccttaatcagcagatccaagaggaaagctttaacatgtct
ttacagacaaatacacaaaaagagctccgagggctgatgctgacaactctctctgttgtt
aacataacatcaatgcagactgctctgaagatgtcagaggtgctgaaagaaatcacttat
aggagtgaagagctctctgtctcagcacaggtggaagccagcaacactctgaaatatgtc
agtgcctccttgcttgctgtaaacacagagcacagcagagatggtcaggagttaaaggaa
gcagccaactatctgtttaatgcagtgagcaatgttcttaaagcttctgtagaaatcaga
gctgggaacatttcagtgccagaggcagaacagagttcagtgtcacaccagctcctgagt
acagttgaaaatctccagagtgcccttctgtttgggaaggcaccaggtgatgagccaacc
gtcctcacctctccctctgccacaatgtatatgcacagattacaaacagaaaacatggat
agcacatccattaacatctcaaattccagctctgccagctttactctcccacctgcttcc
tctctcaatgtttcaggagttaatggtgaaacagtggatataaggatggtgagctttgcc
atgaatcccttttactccagtgacaacagttttgacatcagtggaacagtgggaggtcta
agtctatctggtctggatggtttgatcataccagtcagcaacctcaaagagaacattgag
atcatcttaccacggctgtcagcagctcaggaagataagattctgttgaatctgggcaat
tatagcacttttcaagtcaatgttacttcagaaaacacatctatagtgatctacctggaa
tctgaacatgacatcccactaatactttacttggggtatggttatcttccaaatgaaacc
aattatgacatgaaaaatcatctattgtataagaaaacttctggaggtgagacaaacagc
tgggttgtcagcccagaagaactcatttttggagagggaacctactatttcatggttgta
caagacatgggaatggattcaacagtctacaatgggctaagcataaatgccacttgcttt
gcatcccgctgtgtattttgggatgagcaccaggggggctggagcagctatggatgtcat
gtaggaccgaaaacaaatcctagcagcacacagtgcctctgcaaccatctgaccttcttt
gggagctccttctttgtcatgcccaatgccatagatgtcagcaaaacagcacagctgttt
ggtacatttgtggacaatcctgtggtggtgacaactgtaggatgcatctttctgatatat
gtgcttgtagttatttgggctagaaggaaagacatccaggatgatgccaaagtgaaaatc
acagtcctggaagacaatgacccctttgctcagtatcgttaccttgtgacagttttcaca
ggacaccgccgtggtgcagccacaacctccaaggtgactctcaccctctatggactggat
ggagagagcgagccccaccatctaaacgatcctgatacatcagtctttgaacgtggagga
gtggatgttttcctcctctgtaccttcttccctcttggggaactgcagagtattagattg
tggcatgataattcaggggacagtccatcctggtatgtgaatcgagtattagtccatgat
ctggcatgggatcagaaatggtacttcctctgtaactcttggctagccattgatattgga
gaatgtgtcctagataaagtgttcccagtagcaacagaacaggacatgaagcagttcagc
aatctgtttttcatgaaaacctccaagggtttccaggatgggcacatctggtactctgtt
ttcaaccgctccccacgaagctccttcacacgagctcagcgtgtgtcctgctgcttctca
ctgctcctctgcaccatgctgaccagcatcatgttctggggcgtgccaaaggatcctgct
gagcagaaaatggatttgggtaagatcgagttcacatggcaggaagtgatgattggcttt
gagagctccctcctcatgttccccatcaacctgcttattgtgcagatcttcaggaacata
cgaccccggccagcccagcagggcagagagaagaagccggcaaagaatggaaagaaagaa
aaagaaagaaacctgcctctcagcccaggggccacccaggctgcctctctcactccagag
gctgtgacaaaggacataagaagaattgccaactcactttttaaagccctgaagacttca
tctctcaccttagcaccagaccttgaaaaatcaactaatatcaacacactgctgtcattg
gttgaggacatcatctgtcagcagaacagagctaggcaaggggtttatgatgagaccaag
aaggatggccctataactgtcacactgggtgctatggatatccaagaaaaaacaagaagt
ccaactccagaggagagaatttgcaaccagctgaaatacagtaattaccatctctgcttg
tacatgcaactccagcatgtagagatggagctgaagttactggggccccataaatttcag
atgccccagagttacacacaagccgtttgtcaggttcagcatatgaagaacctcctggag
aaccaaatctgctcatcagcatccatcactgaggggtggtcccatactcccaacttgtcc
agtgatgacaagaaaagttcttctcccagagggctgccctggtggtttgtgttcattgct
tggttccttgtggcagccaccagcagtgtgtccgggttctttaccatgctctacggactc
cattatggcaaagacaactccatcaagtggctcatctccatggtcatctccttcttggaa
agtcttttcatcacacagcccttaaaggtgctgggatttgctgctttttttgctctggtt
ctgaagaaggtggaacatgaggatgaagaaaacactgctatttatgggcctttatctgca
ccaggtgattcacaccctctctttggggtccgaagggacagtagaagcagtatttactgg
ccacctcctgctgctgatgtggagaaaatgaaaatcagttgcatgaaggagcagaaagca
tttggtctcatcagagaaatcctggcctatctggggtttttatggatgctgttgctggtt
gcctatgggcagagagatcccaattcctactatttaaacaaacacattgaggacagcttc
acggatggattccatgatgtctacagttaccaggattttttcacatgggcaaacactact
ttactcaaaaatctttatggatcatataaaggattcattacagatggcaattccaagctg
gtgggtagtgctcgaattcgccaagtaagagtgaaaggagacacctgccctatttctccc
agactccagcacgtagttgaggaatgccatgctccatactccctacaaacagaggacaca
acagtttatggggagcactggaatacctcagtctctgataattcctctgacttgagctca
gcatggcaatatcagagtcagtccaaactgagaggacaccccagctggggtaaacttgcc
atctacagtggagggggatatgtgattcacctgggaacagaccctaaaaatgcctccaga
attctccagtaccttttcaacaatgtctggcttgacaccttcacaagagcagtgtttgtt
gaatttacagtctacaatgccaacgtgaacctcttctgcattataagcctgatgtttgaa
agcaatgctttaggggctttcttcacaagtgcagagctgcaaagtgtccggctctacccc
tacaccgacagcctccacatctttgtggttgcagcagaagtcatttatttcctctttatt
gtgtactacatgacagtacagggaaagctgctgaagagtctgagatggagatacttccat
agcaagtggaatctcctggagatggccattatattgattagctggactgctttgtcagtg
tttgtgaaacggacagtccttgggacccaggacatcagctactaccaggatcacaaggag
ggctccataagcttcagtgaaacagcgagagctgatgcagttcttggctacctgattgca
ttcctggtgcttctctccacagtgaaactgtggcatctgctgaggctcaaccctaaactg
aacatgatcacttcaacactaaggagggcatggggtgatatctctggattcatcactgtt
attacaatcatgttccttgcttattccactgctgcaaacctgatatttggctggaagctc
tactcttacaaaactctctttgattcggcagagaccatggtcagtcttcagctgggaatc
ttcaactatgaggaggtcttggactacaatccaattttaggctccttcttaattggatcc
tgcatcatttttatgacatttgtggtactgaatctgttcatttcggtgattctggttgct
tttagtgaggagcagaagcattaccaggcttcagaagaagaggagattgttgatctaatg
ctaatgaaagtcttcagtttctttgggataaaatgcaggaaggaagagaagccggtcact
ggggaacaactggaacaacctgtcagcaagtga
DBGET
integrated database retrieval system
