Cinclus cinclus (white-throated dipper): 134048385
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Entry
134048385 CDS
T10813
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134048385 (IRX5)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134048385 (IRX5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
134048385
NCBI-ProteinID:
XP_062356104
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Position
11:complement(10110075..10112963)
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AA seq
472 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTAADPKAAPGCERLQESPGPREA
ESGLSDSDCKELAEERLDGPPVPHKAPGASPMGPCPAGRGPPPAGGEEPPPYRPPSTAAG
PPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPAV
LGGSGPSRSPPRPRSPGAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGPA
AAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctctgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggttccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggaccctgcgtaccgcaagaacgcg
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcggcggcggctcaagaaggagaacaagatgacctggacc
ccacgaaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactagaggagaaaggggaccccgggacgccggacacagcggcg
gatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccggccccagggaggcc
gagagcggcctcagcgactcggattgcaaagagctagcggaggagcggctcgacgggccg
cccgtcccccacaaggcgcccggcgcttccccgatgggaccgtgcccggcgggccggggg
ccgccgccggcgggcggcgaggagcccccgccgtaccgcccgccctccaccgccgccggg
ccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtcatc
cactcgccgcagcaggcggccctcgccaaacccaagctctggtcgctggccgagatcgcc
acctcggcggacaaggctaaggaagccggaggcgaggcggcaccccccggccccgccgtg
ctgggaggcagcggcccgtcccgctcgccgccgcggccgcgctcgccgggcgcgcagtgc
cccttccccaacggggcggtcctgccccggccgctctactacacggcgcccttttacccc
ggctacacgaactacggctccttcggggccctgcacgggcaccccgccggcggccccgcc
gctgccgcccccggcgcccacttcaatggattaaatcagactgtcctcagcagagccgag
agcttggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaagac
tcaccttacgaactgaagaaaggtatgtccaacatttaa
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