Cinclus cinclus (white-throated dipper): 134048504
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Entry
134048504 CDS
T10813
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134048504 (IRX2)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134048504 (IRX2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
BUD22
Motif
Other DBs
NCBI-GeneID:
134048504
NCBI-ProteinID:
XP_062356273
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Position
1:complement(89252394..89256849)
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AA seq
478 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEELARSSSGSAFSPYPGSAAFTAQAAT
TGFTSPLQYSTDPATGFPSYMGSPYDAHTAGMTGAISYHPYGSPAYPYQLNDPAYRKNAT
RDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAP
RNKSEDEDDDEGDGARSKEESPEKMPESNETSAEDEGISLQVDSLTDHSCSAESDGEKLP
CRAGDPLCESGSECKDKYEDIEEEDEDEDEDEEEDIEEDDGGGGERDPPAKPATSSPLAA
VEAPLLGHPHTDAARSASKAALGPRASPGPPTPANKPKLWSLAEIATSDLKSQTLGQGCQ
PAPLSSATPASAPHSAAYSPSSLLGRHIYYTSPFYSNYTNYGNFNALQSQGILRYNSAAV
ASNEGLSQTVLNASSVHKQSSDSLKTITNQLEQHYRPSSYDSKKDPTEVCTVGVQPYL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagccccccggctcgctggctctgtactcctgc
ccggcgtacggggcgtctgcgctggcggcccccaggagcgaggagctggccaggtcttcg
tcgggatcggcgttcagcccttacccgggatcggcagctttcaccgcccaggcggcgacc
acaggcttcaccagcccgctccagtactccacagaccccgccacgggattcccctcctac
atgggctccccttacgacgcccatacggcggggatgaccggagccatcagctaccacccg
tacggcagccctgcctacccctaccagctcaacgaccccgcgtacaggaaaaacgccacc
cgcgacgccacggccacgctgaaggcctggctgcaggagcaccgcaagaacccctacccc
accaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtctcc
acctggttcgccaacgcccgccggcggctcaagaaggagaacaagatgacctgggccccg
cgaaacaagagcgaggacgaggacgacgacgaaggcgatggcgcgaggagtaaggaggag
agtcccgagaagatgcccgagagcaatgaaacctccgcggaggacgaagggatcagcttg
caagtcgactcgctgacggaccactcctgctccgccgaatcggacggcgagaagctgccc
tgccgagcgggagaccccctctgcgagtcgggctcggagtgcaaggacaagtacgaggac
atcgaggaggaggacgaggacgaggacgaggacgaggaggaggacatcgaggaggatgac
ggcggcggcggggagcgcgacccgccggccaagcccgccacctcctctccgctggcggcc
gtggaggccccgctcctcggccacccgcacaccgacgccgcccgcagcgctagcaaggcg
gcgctggggccccgcgcctcccccggccccccgacgccggccaacaagcccaagctctgg
tctctggccgaaatcgccacctcggacctcaagagtcagaccctgggccaaggctgccag
cctgcgccgctctcctcggccacccccgcctccgccccgcacagcgctgcctactcgccc
tcctccctcctggggaggcatatttattacacctcacctttttatagcaattatacaaac
tatgggaactttaacgctctgcagagccagggaatcctgagatacaactccgcagcagtg
gcttcaaacgagggactaagtcagactgtcctaaatgccagctctgtccacaaacagagc
agtgactctttgaaaacgatcacaaaccaactagagcaacattacaggccctctagctat
gactctaagaaagatcccactgaagtctgcacagtaggagtacaaccatacctatag
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