Cinclus cinclus (white-throated dipper): 134048516
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Entry
134048516 CDS
T10813
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04137
Mitophagy - animal
ccic04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
134048516 (AMFR)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134048516 (AMFR)
Multi subunit type E3
ERAD complex
134048516 (AMFR)
LMBR1L-GP78-UBAC2 complex
134048516 (AMFR)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
134048516
NCBI-ProteinID:
XP_062356300
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Position
11:8275774..8305995
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AA seq
657 aa
AA seq
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MPLLFLERFPWPSLRTYTALSALALLGAGLSAYRALSQTPGGAAGSEPAEPQRCSGPRAL
DVAYYLLSDSLCVWVLVNTACCFLMLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLALLI
AMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNITDSHQVREDHQRENENLVPVAAAEGRPRLNQHNHFFHFDGELSTCRS
TWPAEILVLFLDYLGDFLLPGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQ
EMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALNNSVERHSTDQ
EDTGTVTQTERVPLELNSRLEEMVEFNEMEAEPNEAEDFEARGSRFSKSADERQRMLVQR
KEDLLQQARKRYLNKTSDEELSTEKPFPEGAAADAVTLRRRTLAAAAERRLQMQQNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctggagcgcttcccctggcccagcctccgcacctacacggcgctc
agcgccctggcgctgctgggcgccggcctcagcgcctaccgcgccctcagccagacgccc
ggcggggcggcgggcagcgagccggccgagcctcagcgctgctccggcccacgggccctg
gacgtcgcctactacctgctctccgacagtctctgcgtctgggtactagtgaacactgcc
tgctgttttctgatgctggttgcaaagctaatccagtgtatggtgtttggtcctcttcgt
gtcagcgaaaggcagcatctcaaggataaattctggaatttcattttctacaagtttatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtagtgatgtggtgcctctgg
ttctctggacttgtgtttctccatctgatggttcagctctgcaaagatcgctttgaatat
ctttccttttctcctaccacacccatgagcagccacatcagagtgctggccctgctcata
gccatgctcctgtcctgctgtggattagcagttgtctgtggagttgttggctacacccat
ggcatgcacacattggctttcatggcagcagagtctctgctggtgacagtcagaactgct
catgtgattttacgatatgtagttcatctgtgggatctcaaccatgaaggaacatgggag
ggcaaaggcacttatgtctattacacagattttgtcatggagctaaccttgctttccctg
gacttgatgcatcatattcatatgctgttgtttggcaatatctggttgtcgatggcaagc
ctggtgattttcatgcagctgcgctacctgttccacgaggtgcagcggcgaattcggcgg
cacaaaaactacctgcgtgtggttggaaacatggaagccaggtttgcagttgcaacacca
gaggagctagcagtgaacaatgatgactgtgccatttgctgggactccatgcaatcagca
cgcaaactcccttgtggccacctcttccacaactcatgcctgcggtcctggctggagcaa
gacacatcttgccccacctgcagaatgtctcttaatatcactgacagccatcaggtgagg
gaggatcaccaaagggagaatgagaacctggtccccgtggcagcagcagaaggcagacca
cgcctgaaccagcacaatcacttcttccactttgatggtgagctgagcacatgtagaagt
acatggcctgctgagattctcgtgctctttcttgactatcttggtgatttcttactccca
ggctcccgaattgccagctggctgcccagtttttctgtggaagttatgcataccaccaac
atccttggaattgcacaagccagcaactcccagctcaatgttatggcccatcagattcag
gagatgttccctcaggttccttatcatttagttctgcaggatctgcagctaactcgttct
gtagagatcaccactgacaacatcctagaagggcgcatccaggtgcctttccccacacag
cgtgcagatagcattagacctgcattgaacaactctgtggaaaggcacagtactgatcag
gaggatactggaactgtcacacagactgagagagtgccacttgaactgaactccagactg
gaagaaatggtggaattcaatgaaatggaagcagaacctaatgaagcagaagattttgag
gccaggggaagtcgcttttccaagtcagccgatgaaaggcagcgtatgttggttcagcgg
aaggaggacttgttgcaacaagctcgaaagcgttacttaaacaaaacctccgatgaggag
ctgagcacagagaagccttttcccgagggagcggcggccgacgccgtcaccctgcgccgc
aggaccctcgctgccgctgccgaacggagacttcagatgcagcaaaactcctag
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