Cinclus cinclus (white-throated dipper): 134048582
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Entry
134048582 CDS
T10813
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134048582 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
134048582 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
134048582
NCBI-ProteinID:
XP_062356407
LinkDB
All DBs
Position
12:15054589..15083823
Genome browser
AA seq
1423 aa
AA seq
DB search
MEAAATGGEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLV
SEKKIDKNLLPPKKIIGKNSKSLVEKRQKELEIYLQTLLLKFPVTAPKVLSHFLHFHLYE
INGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHIL
DFTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHA
LATLSVRFSATSMKEILAPEASEFDQWEPEDALDNSNCPVTAIIPTWRTLTTLDMSHNSI
SEIDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKT
LNLAGNQLERLCGLNKLYSLVNLDLSSNKIEQIDEVKNIGNLPCLEKVMLSSNPLSIIPD
YRTKVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRL
TAASSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSLLQSSGLTPTDHTVPQRCF
EIPDSRCKIQAPASLLASCKEYGGDHRVCLESLEEEHCAVPDPCNTIILPFNCMSYTATN
QDFIQHLSALIVQAVQKSAPSLTVNKGSPTGNSTTTDKEDGYFEMGLHEGDQTFEFSTTW
DTQSSDNIAVEGVYIVKILWSFSIHIHKGLRQFASCLVLTDEMLAVFEIPHQELRGNCQH
IPSALKLTLCFPYTDLIEFGFLLPEICLTLKLKNSDHCLFIVSDSQNLQDFYSCLQTCCS
QHYTSVLPSSTWCCRKANLQEFLCQLMEFNCISAEDVEIKGCFPTYLVYGGKTSIQKVLH
QPESASNKNEWSKNALCSALYSSVYKSSDQGPCVVHPCWIFLTPQHLYIVKVDFSLLPSE
RVGTEELGSVFKLNRIPLASLVLHPTHSATQQKGSFLDGHVLELLVGYRFVTAVFVLPHE
KFHFLRIYSLLRTLLQDVKTIIIFKASSKSDAVKNHFVEANRHSQAASFCKPHLTLSSFY
PSEFLMQKITEDNQIPVHLHVSVSLQYVAGLKGRALVEFFHSNIAEVENEELRHLMWSSV
LFYKTPNVEVMSCVLLSTKAIYFLLDDSFIHADEHQSDFWNKENSDCENSSFLLSCCFVL
KLNDLQSVNVGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEP
VDKDFYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLPSLNI
LLYVLAFQVNHFEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQ
LADGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSVPKGNSKQEG
SRSREIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcggcgacgggaggcgaggatggcgaggagcccccgcgggaagcccgagtc
ctaggctccgagctggtggagacgtacacggtgtacattattcaggtcagtgttggcaat
catcaatggacagtcaaacatcgttacagtgatttccatgacctgcatgaaaagcttgtt
tcagagaagaaaatagataaaaatctgttacctccaaagaagatcattggaaaaaattcc
aagagccttgtggagaaaagacaaaaggaactggagatctacctgcaaactctgctgctc
aagttccctgttactgcaccaaaagttttgtcacacttcctacactttcatttatatgag
atcaatgggatcactgctgcattggctgaagagctctttcacaaaggagagcagctctta
atggctggagaagtcttcaccatcaggcccttgcagttgtatgctgtcactcagcagctg
ctgcagggcaaacctacctgtgctaatggagatgccaaaacagatctagggcatattctg
gatttcacttgtagactcaagtatctaaaggtcactggaacagggggaccttttggaacc
agtaacattcaggagcatcttttgccttttgatttgtctattttcaaatcacttcatcaa
atagagatcagtcattgtggaggaaagcttatcaaagggctgacttcatcaaaacatgct
ctggccacactaagtgttcgattttcagcaacatcaatgaaggaaatcctggcacctgag
gcctctgagtttgatcagtgggagccagaggatgcactggacaattcaaattgtccagtg
acagcaattatcccaacctggagaactttaacgaccttggatatgagtcacaatagcatc
tctgagattgatgactcagtgaaattaattccaaagattgagttcttggatttgagtcac
aatggggtgtctctggtagaaaatttacagcatctgtacaaccttgttcacctggactta
tcctacaacaaacttacatcactagaaggtgttcacacaaaacttggaaacatcaaaact
ctgaatttagcaggaaaccagctggaaaggctgtgtggtcttaacaaactgtactcattg
gtcaacttggatctgagcagcaacaaaatagaacagattgatgaagtaaaaaacatcggc
aacctcccgtgcttagaaaaggtgatgttatccagcaacccactgagcatcatccctgat
taccggaccaaagtgctcgctcagtttggagacagggcttcagaggtttgtttggataac
attgttaccacagaaaaggaactagacacagtggaagtgctaaaagctattcaaaaagca
aaggaggtgaagtacaaactcagcaattctgataaaaagatcagtgaggactccaggctc
actgctgccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccctct
ctgcctcgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagc
agtcttttgcaatccagtggtttgactcctacagaccatacagttccccagagatgcttt
gaaataccagactccagatgtaaaattcaggcacctgcctctttattggcttcatgcaaa
gagtatggtggtgatcatcgtgtgtgtttggagagtttggaggaagagcactgtgcagtg
cctgacccctgtaacacaatcatcttgccttttaattgtatgtcctacactgccaccaac
caagactttatccagcacctttctgccttgatagtgcaggctgtgcagaaatctgccccc
tccctcacagtgaacaaaggaagccctactggtaattccacaaccacagacaaagaagat
ggatattttgaaatgggacttcatgaaggagatcagacttttgagttcagcactacttgg
gatacccaatcatctgacaacatagcagtggagggtgtttacatagtcaaaattctctgg
agcttttcaattcacattcataaaggactcagacagtttgcttcctgtttggttttgact
gatgagatgctagctgtatttgagattcctcatcaggaattgagaggaaattgccagcat
atcccttctgccttgaaattaacactgtgttttccctacactgatctaatagaatttggc
tttctcctgccagaaatctgtttaactctgaagctgaaaaacagtgaccactgcttgttt
attgtttcagactcccagaatcttcaagacttttattcctgtttacaaacatgttgctct
caacactacacatcagtgttaccaagctccacatggtgctgtagaaaagcaaatctccaa
gaatttctctgtcagctcatggaattcaattgcatttcagctgaagatgttgaaataaaa
ggttgtttcccaacatatcttgtttatgggggtaaaaccagtattcagaaagtcttgcat
caaccagagtcagctagcaataagaacgaatggtcaaagaatgctttgtgttctgcactt
tattcttcagtgtataaatcttctgaccagggtccctgtgtggtccatccatgttggata
tttctaacaccccagcatttgtacatagtaaaggtggatttcagtttactgccaagtgaa
agggtaggcacagaagagttgggaagtgtttttaagctgaatagaattccactggcatca
cttgtgctgcatccaactcacagtgccacccagcagaagggttcatttttggatggacac
gtgctggagttgcttgttggatacagatttgttacagcagtgtttgttctacctcatgag
aaattccacttcctaagaatctacagccttttaaggacactcctgcaggatgttaagact
attattattttcaaagcttcaagcaaatcggatgctgtaaaaaatcattttgtggaggca
aacagacacagtcaggcagccagtttttgcaagcctcatctgacactgtcatccttttac
ccatctgagtttcttatgcagaagataacagaagacaaccagattcctgttcaccttcat
gtttctgtgtctctgcagtatgtggctgggctgaagggaagagcccttgttgaatttttc
catagcaacattgcagaggtggaaaatgaagagttgagacacctcatgtggtcttcagtt
ctgttttacaagactcccaatgtagaagtgatgtcttgtgtgcttctctcaacaaaagct
atttactttctgttggatgattcttttattcatgcagatgagcaccagtcagatttttgg
aacaaagaaaactcagactgtgaaaacagttctttcctcctctcttgctgctttgtgcta
aaacttaatgaccttcaatcagtaaatgttggcctgttcgaccaatacttccgaattact
ggacattctgcagatcacattgtcacctgcctgacaagagacagttacaacactcacacc
ttcatacagcagcttatggcagtcctgtcactgcttgcacgcactccttcacctgaacca
gtagataaggacttctactctgaatttgggagtaaaaacacaggaaaaatggagaattat
gaactgattcactctagcagagtaaaatttatttatccaaatgaagaggaaattggggac
cttgcttttctagtggcagagaagatggatggtttgaccaatcttccatccctcaacatt
cttctgtatgtgttggcatttcaagtaaatcactttgaaggatctgctcagaacactagt
tcacttcaacctaaaacactgatattgaccagctctgatttattcctctttgatgaagat
tatatcagttacccactacctgaatttgctaaggagccaccaaagagagataagtatcag
cttgcagatggaagacgaatccgggatttagacagagtactcatggggtatcagacatat
ccacaggccctgacatttgtgtttgatgacgttcagaatcaggacctgatgcagaattta
acactggatcactttggagaaactgatagtgtcccaaagggaaactccaaacaagagggg
agcaggagcagagagatccagtggtacatttttatcccaagtgcagaaagcagggagaaa
ttaatttcattgcttgcaagacagtgggagatcctgtgtggtagggaactgcctttggaa
ctcactgggtag
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