Cinclus cinclus (white-throated dipper): 134048815
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Entry
134048815 CDS
T10813
Symbol
TRAIP
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134048815 (TRAIP)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134048815 (TRAIP)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134048815 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
CCDC170_1st
CEP135_TSGA10_CC
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
CCDC39
RINGv
zf-C3HC4_4
RING_XB3-XBAT31
CCDC171
EXOC6_Sec15_N
zf_RING_Vps8
Rod_CreS
HmpF
T3SSipB
zf-RING-like
Zn_ribbon_8
HH_AprE
zf-Nse
ATG17_like
ZapB_rel
FAR1_N
WEMBL
ODF2_C
Cast
GAS
Phage_scaffold
U-box_ZFPL1
MAD
PI3K_P85_iSH2
HIP1_clath_bdg
LEKR1
FH2
BU584_C
DUF1664
OVT1
Motif
Other DBs
NCBI-GeneID:
134048815
NCBI-ProteinID:
XP_062356808
LinkDB
All DBs
Position
12:16888486..16908209
Genome browser
AA seq
507 aa
AA seq
DB search
MPIRAFCTICSDFFDNERDVAAVPCGHTFHQACLLQWFDTAPSRTCPQCRNQVSKRHIIN
KLFFDVTLEEQAAPDAESLQNELDKVKAQLSLKEKEKRECQTVVDKLRDTLDVRNATIES
LQKMLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEAHRLRNKLRSMERIELLLQSQRPEV
EEMIRDMGVGQAAVEQLATYCVSLKKEYENLKEARKISGEMTEKLKKELFSVNNKLQKTT
SELEKTKEELKSTQKDLKSADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPAPLE
LQHPKLHCPAHSDEINLDATYNVDTPEQQPCAAPLGPAKRQKLDKKPPPVVNLVKKVLKE
TVENGADDLEDDALKGLLPAFIRNSVFSRKSPSGGLLGSHRNMGSVRMGYDGMGGRTKFI
EPTNLAEIRPLSVRSKKKVSRPASATPPAFASRSSQSSAVAAALGSLAPGGTALLRCSHK
QEVQEGCLGCQSESSREKGPGPAPCLV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgccttctgcactatctgctccgacttcttcgacaatgagcgggacgtg
gcggccgtgccgtgcgggcacaccttccaccaggcctgcctcctccagtggtttgacact
gcaccaagccggacgtgcccacagtgcagaaaccaggtcagcaaaagacacatcatcaat
aagctgttttttgatgttaccctggaggagcaagcagcgccggatgctgagagcttgcag
aatgaactggacaaggtgaaggcccagctctccttgaaagagaaagaaaagcgggaatgc
cagactgttgtggacaagctgagggacactctggatgtgcgcaatgccacgatagaatcg
ctccagaagatgctgggagagacagagatgctgtgctcttctctcaagaagcagatgaaa
ttcctggagcagcagcaggaggacaacagaagttcaaaggaggaggcccaccggctgcga
aacaagctgagatccatggagcggatcgagctgttgcttcagagccagcgcccagaagtg
gaggagatgatcagagatatgggagtcgggcaggcagcagtggagcagcttgcaacctac
tgtgtctccctcaaaaaggaatatgagaacttgaaggaggctcggaagatctctggtgag
atgacagagaagctgaagaaggagctgttttctgtcaataataagctgcagaaaacgact
tcagagttggagaagacaaaggaggaattaaaaagcacacagaaagatctgaagagtgca
gacaaggagatcttgagtttgaagaagaagatagatatcctgcaggatactctgaaggtc
ccatctgtaaccagggaaacactcagtcggctagtctttgaaagccctgctcctctggaa
ctgcagcatccaaagctccactgcccggcccacagcgatgagatcaatctagatgctact
tacaatgtggacacccctgaacagcagccctgtgcagctcccctcggccctgcaaaaagg
caaaagctggataaaaagccgcctcctgtggtaaatctggtgaagaaagttctgaaggaa
acagtggagaatggggcagatgatctggaagatgatgctcttaaaggactcttgccagca
ttcatcaggaactctgttttctccagaaagtcaccttcaggtggtttgctgggttcccac
aggaacatgggctctgtgaggatgggctacgatggcatgggaggcaggacaaagttcata
gagccaacaaacctggcagaaatccgtccattatcagttaggagcaagaagaaggtctcc
agaccagcatctgcaactcctcctgcatttgcttcccgcagcagccagagctctgcagtt
gctgctgctttgggctctctggcaccaggtggaactgcacttctcagatgcagccacaag
caggaggtgcaggaagggtgtctgggatgtcagtccgagagcagcagggagaagggacct
ggaccagctccatgcctggtgtaa
DBGET
integrated database retrieval system
