Cinclus cinclus (white-throated dipper): 134048898
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Entry
134048898 CDS
T10813
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134048898 (USP4)
Peptidases and inhibitors [BR:
ccic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134048898 (USP4)
Ubiquitin system [BR:
ccic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134048898 (USP4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134048898
NCBI-ProteinID:
XP_062356962
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Position
12:complement(14083072..14115136)
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AA seq
952 aa
AA seq
DB search
MAAAAAGGERARPDPAEQRAELGPLLATALRPGESWYLVESRWFKQWKKYVGFDSWDMFG
AGDPNLFPGPVDNAGLFPGPIDNSGLFSDPETQSLKEHLIDELDYVLVPTEAWNKLVAWY
GCIDGQQPIVRKVVEYGLFVKHYKVEVYLLELKLCESSDPDNVISCHFSKADTVATIEKE
MRKLFNIPAEKETRLWNRYMSNTYEQLSKLDSTVQDAGLCQGQIVLIEVKNEDGKWPGQH
CLAKSSTATSRNFTTSSKSSASSYSSVSATSVITNGDSSNSYGLNSSHLGRGGSGFVCNS
YNCRDNASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQSNPLGM
RGEIAEAYADLIKQMWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE
DLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKV
SVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQRRPVQYRVVVPMMGAISDLCESLSKLSG
VPAENMVVTDVYNHRFHKIFQMDEGLNHILPKDDIFVYEVCKPSEDGSEYVTLSIYFREK
TMRQSSNTSGTVLFGQPLLISVPKHKLTVDHLYSVVLEQISRCLKLPLAEEYSTPCPDRG
TCNGSNGVVEGDIEEMEHQDGGEEGKEKLTDVDPCHSEGCMQVESARDLQPCKKQHFTFS
LVNSSGTSEINSIVEGKILKLNAFSAVAIDWDSETRRLLYDEQEAQAFEKHGSMLQLQKK
KAVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSR
YWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAMGVGHYTAYAKNKVND
KWYYFDDSSVSVASEDQIVTKAAYVLFYQRRNSEEHSAPSAPQEECDGMDTN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcggccggcggggaacgggcccggccggacccggcggagcagcgggcg
gagctggggccgctgctggccacggctctccggcccggcgagtcctggtacctggtggag
agccggtggttcaaacagtggaagaagtatgtgggctttgacagctgggacatgttcggc
gccggcgatcccaacctcttcccgggccccgtcgacaacgcgggcctgttcccggggccc
atcgacaactcgggcctgttcagcgatccagaaactcagagtctaaaagaacacctcatt
gatgagctggattacgtgctggtacccaccgaagcctggaacaaactagtagcatggtat
ggctgcatagacgggcagcagcctattgtgagaaaagtggtggagtatgggctgtttgtg
aagcactataaggttgaagtttatctcctggagctgaagctgtgtgagagcagtgatcct
gacaatgtcatcagctgccacttcagcaaggcagatactgttgctaccattgagaaagaa
atgagaaaactattcaatatcccagctgagaaggaaaccaggctatggaacagatatatg
agtaacacttacgagcagctcagcaagctggatagcacagtgcaagatgcagggctctgt
cagggtcagattgttttaatagaagtgaaaaatgaagatggcaagtggcctggacagcat
tgcctggcaaaatcaagcactgcaactagcagaaactttactacctcttcaaaatcatca
gcaagttcttattcctcagtgtctgccacttctgtcattactaatggtgatagcagtaac
tcctatggactgaacagctcccacctgggcaggggaggttctggatttgtctgtaactct
tacaattgcagggacaatgcttccctgtcacaacctggactctgtggactcagtaacctt
ggaaacacctgcttcatgaattctgcattacagtgcctgagcaatactcctcctctgact
gactacttcctggaagataaatatgaagctgaaataaatcagagcaacccactggggatg
aggggagaaattgcagaagcctatgcagatctcattaaacagatgtggtctgggagacag
tcccacgtggccccacgtatgtttaaaacacaggttgggcgatttgctcctcagttttca
ggataccagcagcaggattcccaggagctcttggcttttctactagatggcttgcatgag
gatttgaacagagtgaagaagaagccctacttggagctgaaggatgccaatggcagacct
gattcggaggtggcaaaagaggcatgggagaatcataggctgaggaatgattccatcatt
gtggatatttttcatggtcttttcaagtctacccttgtttgtcccaaatgctctaaagtt
tctgtgacctttgatcccttctgttacctaactctcccactgcccttgaggagggatcgt
ctcatggaagttaccttggtatatgcagacccacagcgcagacctgtccagtaccgagtt
gtggtgccaatgatgggggccatctcagatctgtgtgaatcactttccaagctctctggt
gttcctgcagaaaatatggtggtgacagacgtgtataatcaccgattccacaaaatcttc
caaatggatgaaggtttgaatcatatcttgccaaaagacgacatctttgtgtatgaagtg
tgcaagccaagtgaggatggctcggagtatgttactctctccatttattttcgggaaaag
acaatgaggcaatccagcaatacttcagggactgtgctctttgggcaaccactgttaata
tctgtgcccaaacacaagctcactgtggatcacctatacagtgtggttttggagcagatc
agccgctgtttgaagctccctctggcagaagagtactccacaccctgcccagacagagga
acctgcaatggctccaatggtgtggttgaaggtgacattgaagagatggagcatcaggat
ggcggagaggaaggcaaggaaaaactgacagacgttgatccctgccactctgagggctgt
atgcaagtggagtcagcaagagacctgcagccttgcaagaaacagcatttcacttttagc
cttgtgaattcctccgggacctcggagataaactccattgttgaaggaaaaatcttaaaa
ctgaatgctttttctgcagttgccattgactgggattccgagacacggaggctactttat
gatgaacaggaggcacaggcatttgaaaaacatggaagcatgctacaactacagaagaag
aaggctgtagtagccctcagagactgcatagagctcttcactactatggaaacacttggt
gaacatgacccgtggtactgccctaactgtaagaaacatcaacaggccacgaagaaattt
gacttgtggtctttgcccaggattttggtggtacatttaaaacgcttctcatacagcaga
tactggagagataaacttgacactgttgtggaattccccatcaggggtttgaacatgtcc
gagtttgtttgcgacccaagagcaggctcatacgtgtatgacctcattgcagtttccaat
cactatggagccatgggagtgggccactacactgcctatgcaaagaacaaggtcaacgac
aagtggtactactttgatgacagcagcgtctcggtggcttcagaagaccaaatagtgaca
aaagctgcatatgtgctattctatcagcgccgaaacagcgaggaacattctgccccctct
gctccccaggaagagtgtgatggcatggacaccaactga
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