Cinclus cinclus (white-throated dipper): 134048950
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Entry
134048950 CDS
T10813
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134048950 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134048950 (TGIF1)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134048950 (TGIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
134048950
NCBI-ProteinID:
XP_062357048
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All DBs
Position
1:complement(103328632..103338982)
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AA seq
367 aa
AA seq
DB search
MSQAAGANRQQKGTKERGGGKPTPAVSESPRGRQSPAAPADSSAAADRVPGSAVVFLLSS
STSTSSPSLKGESSVRRRERNLGRYVGCPAIGSVLAIKMKSKKGVVAISGSETEDDDTMD
VPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSRQTHLSTLQV
CNWFINARRRLLPDMLRKDGKDPNQFTISRRGTKLPEGGLVESAISPKNYIPLLEETSFL
PAAAPLGKTVSSSKPASPGSVLARPSVICHTTVTALKDAPFHFCQPADVGQTTDLQQPPA
GGFTDNPLSCHEDASKLGPGANTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEME
MQAKLMA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagctgccggggccaatcgccagcagaagggaacaaaggaaagggggggaggg
aaacccaccccggccgtatcagaaagcccccgggggaggcagagccctgcggctcccgct
gacagcagcgcggccgcggacagggtgcctggctccgcggtggtgtttcttctttcttca
tcgacctccacctcctcgccgagcttaaagggggaaagcagcgtccggcgaagggagaga
aacttgggtcggtacgtggggtgtccggcgatcggctcggtcctcgcgatcaagatgaaa
agtaaaaaaggtgtagttgcaatatcaggcagtgaaacggaggatgatgacactatggat
gtcccactggatctttcctcatctgctggctcgggcaaacggcggagacgtggcaacctg
cccaaggaatctgtgcagattcttcgggactggctctatgagcaccgatacaatgcttac
ccttcagagcaagaaaaagcgctgttatcccgacaaacacacctttccacactacaggtc
tgcaactggtttatcaatgcacgccgcaggctgttacctgacatgctgaggaaggatggc
aaagacccaaatcaattcactatctcacggcgagggaccaagcttcccgagggtggcctg
gtggaatctgccatcagcccaaagaactacattcccctgctggaggagacctccttcctt
cctgctgccgcaccgctcggcaagactgtgtcctcttccaagccggcctccccgggctcg
gtcctggctcggccgtcagtgatttgccacacgactgtgactgcgttgaaagatgcccct
ttccacttttgccagccagctgatgtaggccagaccacggacctgcagcagcccccggct
ggtggcttcacagataaccccctctcctgccacgaggacgcatccaaactgggacctggt
gcaaacacacaaagtgggctctttaacactcctcctccaacaccaccagaccttaaccag
gattttagtggatttcagcttctggtggatgttgcactcaaaagggcggcagagatggag
atgcaggcgaaacttatggcctaa
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