Cinclus cinclus (white-throated dipper): 134048989
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Entry
134048989 CDS
T10813
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ccic Cinclus cinclus (white-throated dipper)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
134048989
NCBI-ProteinID:
XP_062357108
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All DBs
Position
13:10912659..10925029
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AA seq
1078 aa
AA seq
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MRLPVLCALVTLLSLSRCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYITGRDQVYTVNLNEVPKSEVIPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYQLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAE
SEEERRVISLQLDRDHHALFVAFSSCVVRIPLSRCARHGSCKKACIASRDPYCGWLDHEA
CGRVTPGMLTGGYVQDVEYGNTAQLGDCNEILPTTATPDYKIFGDPTSDMEFSSASITTM
ASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDLFVRKSRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAALPTPESTPVL
QQKTLQAMKSQSDKAHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIPSAIVLPNATH
DYNTSFSNSNAHKADKKMQHMDHPLTKSSSKRDHRRSVDSRNTLNDFLKHLNETTNNPKA
IMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPAVPM
TSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTAGTKMDYMQGT
PVSVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSVRPLNKYSY
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccccgtgctctgtgccttggtgacgctgctgagcctgtcccgctgccgggcc
gtcagcttccccgaagatgaggaccccattaatgttgtggactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctgatgttgaaaattcgagacacactttatatcactggcagggaccaggtttacactgta
aacttaaatgaagttccgaaatcagaagttatcccaagcaagaaattaacatggcgatca
aagcagcaggacagagagaactgtgctatgaaaggcaaacataaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcagttgaatacattagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcggcaacagtagcagatttcctggcgagtgatgctgttatttatcgc
agcatgggggatggatctgccttaagaacaataaagtatgactccaaatggataaaagaa
ccacacttcctccatgccatagaatatgggaactacgtttatttcttcttccgagaaatt
gctgtagagcacaacactttaggcaaggctgtgtattcccgtgtggcacgcatctgcaaa
aatgacatggggggctcccaaagggtcctggagaagcactggacatcctttctgaaagct
cggctcaactgttcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggagtgcccaccgtcgtgggtgtattcaccacgcagctc
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaagtcttc
aaagggagatttaaagaacaaaagactcctgactctgtttggacagctgttcctgaagac
aaagtaccaaagccaaggcctggctgctgcgcaaaacatggcctagcagaagcttacaaa
acctccattgacttcccagatgaaacactctccttcatcaaatctcatcctttgatggac
tcagctgttccctcagtcactgaggagccctggtttaccaaaacacgtgtcagatacaga
ttgacagcaattgctgtagaccacgctgctggaccctaccagaactacacagtcatattc
gttggctctgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcatattactggaagagattgaagcatataatcatgcaaagtgtaatgcagaa
agcgaggaggagagaagagtcatttccctccagctggacagagaccaccatgccctgttc
gtggcattctccagctgcgtcgttagaattcccctgagtcgctgcgcgcgtcacgggtca
tgtaaaaaggcatgtattgcttcacgggacccctactgtggctggttagaccatgaggcg
tgtggaagagtgacaccaggcatgctcactggaggatacgtacaagatgtcgaatacggc
aacacggcacagcttggggactgcaatgaaattttgcctactacagctacaccagattac
aaaatatttggcgacccaacatctgacatggagttctcctcagcttccattaccacaatg
gcaagtatcccagttatatcacctaaagtgattggttcctggaaacctaaagtgactggc
tctcggaaatttgtagttcaagatgacccaaacacttctgattattctgatccattatca
ggtgtcccaaagggtgtgaggtgggaagtacaatcaggagagtccaaccaaatggtacat
atgaatgtcctaatcacttgtgtctttgccgcttttgtcctgggagcctttattgcggga
gtggccgtttactgttaccgggatctattcgtacggaaatccaggaaaatccacaaagat
gcagaatcagctcagtcctgcactgactccagtgggagctttgccaaactgaatgggctg
ttcgacagtcctgtcaaggagtatcagcagaacattgattcacccaaactgtacacaaac
ctgctgaccagcagaaaagagttgcctccaaatggtgataccaagtccatgatgatggac
cacaggggccagcctccagaattagctgcacttccaactcctgaatctacaccagttctt
caacaaaagactcttcaggctatgaaaagtcagtcggacaaagcacatggtaacctcaat
gcttcacgaaaggaaactccactaaaaagccctcagttttttccttctagtcctccaccc
cactctcctctaagtcatggacatattcccagtgctattgtccttcccaatgctacccat
gactacaacacatctttctcaaattctaatgcgcacaaggcagacaaaaagatgcaacat
atggatcatccacttacaaaatcatccagcaaaagagaccacaggagatctgttgattcc
aggaacaccctgaatgattttctgaaacacttaaatgaaactactaataatcccaaagca
attatgggagatattcaagtggcccaccagactttaatgctggacccaatgggcaatatg
tctgagatcccacctaaggttcccaacagggaggcgtctttatactctcctccatcaacc
ctgccaagaaacagtcccacaaaacgagtggatgttcccaccactcctgcagtaccaatg
acctctttggaaaggcagaggggttatcataaaaattcttcacagaggcactcaatatct
gcccttcctaaaaacttgaactcaccaaatggtgttttgttatccagacagccaagtatt
aatcgtggggggtacatggctcctacagcaggcacaaagatggactacatgcaagggacg
cctgtcagcgttcacctccagccttctttgtccaggcaaagcagctacacgagcaatggc
accctgcctcgtacaggaataaagaggacaccctccctaaaacccgacgtgccaccaaaa
ccctcgttcgtccctcagacgacgtcagtcagaccactgaacaaatacagctactag
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