Cinclus cinclus (white-throated dipper): 134049039
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Entry
134049039 CDS
T10813
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
ccic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134049039 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134049039 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134049039 (NEO1)
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
DCC/UNC5 family
134049039 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
DUF7092
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
134049039
NCBI-ProteinID:
XP_062357181
LinkDB
All DBs
Position
13:complement(3204126..3367350)
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AA seq
1466 aa
AA seq
DB search
MAARRARRLLGSLCIALLFAQPPPSGAAARSGSRSLLTESLVRTFTPFYFLVEPLDVLSV
RGASVIMNCSAHCETPPRIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEPTSVRRGGSAVLGCEATAEPAPPPRW
ERDRRALAPDPRVLRLPGGALLVTNASDADAGLYRCALDAGGAPKYSDEAELKVLPDAEE
PQSLALLKPPLSLTRLLGQSAVFPCVAAGFPPPQIRWTRNGEELPTDGSGRFQLLAGGVL
EIRDVAEADAGTFTCIAESGNDTLEAQAELTVQVPPTFLKRPVNIYAHESMDIVFECEVT
GKPTPTIKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAPATAGPLPSAPRDVVATLVSTRFIRLTWRPPASD
PQGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQNLMPETVYVFRVVAQNRHGPGESS
APLKVATQPEVQLPGPAPNIRAFPSSPTSITVSWETPLSGNGDIQNYKLYYMEKGQHTEQ
DVDVGGLSHTVTGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNLTLEVR
NSKSILLQWQPPPAGTHSGQITGYKIRYRKVSRKSDVTESVGGTQLSQLIEGLERGTEYS
FRVAAMTVNGTGPATDWVSAETFESDLDESRVPEVPSSLHVRPLVTSIVVSWTPPENQDV
VVRGYAIGYGIGSPHAQTVKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARFYTIRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQAS
GSAGKGSRPVDLGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVF
CTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMT
DTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPP
QPVISAHPIHSLDPPHHHFHSGSLASPTRSFLHHQLSPWPLGSAMSHSDRADSTESVRNT
PSTDTMPAASAVPGAELPEPEGPFVPSEEEPQGPPTAHVRPSHPLKSFAVPAVPSAGGPF
DPALPSTPLLTQQAPGHPIHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESS
YEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggagagcccggcggctcctcggctccctgtgcatcgcccttctcttcgcg
cagcccccaccgtccggcgccgcggcgcggagcggctcccggagcctcctcacggaatcg
cttgtgagaaccttcactcctttctacttcctggtggagcccctggatgtgctgtcggtg
cgtggagcctcggtgatcatgaactgctctgctcattgcgaaacccctcccagaatcgag
tggaaaaaggacggcactttcctgaacttggtgtcggacgaccgccgccagctgctgcca
gatggatctttattaattaacagtgtggtgcattccaagcataataaacctgacgaagga
tattatcagtgtgtggcaactgtggacagcctggggaccatcgtgagcaggacagcaaag
ctcactgtggcgggtctgcccaggttcacgagccagccggagcccacgtccgtgcgccgc
ggcggcagcgcggtgctgggctgcgaggcgacggcggagccggcgccgccgccgcgctgg
gagcgcgaccgccgggcgctggccccggacccgcgcgtgctgcggctgcccggcggggcc
ctgctggtcaccaacgcctcggacgccgacgcggggctctatcgctgcgccctcgacgcg
gggggcgcccccaagtacagcgacgaggccgagctcaaagtcctgccagatgcagaggag
ccccagagcctggctctgctgaagccacccttgtccctgacgcggctgctggggcagagc
gctgtgttcccctgtgtcgctgcaggattcccacctccccagatcaggtggacaaggaat
ggggaagagcttcccacagatgggtctggccggttccagctgctggctgggggtgtcctg
gagatcagggacgtggctgaggccgacgccgggaccttcacttgcatcgctgagagtggc
aacgacaccctggaggcccaggcagagctgacagtccaagttccccccacgttcctgaag
cgccctgtgaacatctatgcccacgagtccatggacattgtgtttgagtgcgaggtgacg
gggaaaccgacgccgaccatcaaatgggtcaaaaacggggacgtggtgatccccagtgac
tacttcaaaatcgtgaaagaacataacctgcaagttttggggctggtgaaatctgatgaa
ggattctatcagtgcattgcagaaaacgatgttggaaatgcacaggctggagcccagctg
ataatacttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcaccagcgacagcgggacccctgccctctgccccgcgggacgtc
gtggccacccttgtgtccactcgcttcatccggctcacgtggcggccgccagcctcggac
ccgcagggagacaacctcacctactccatcttctacaccaaggagggcatcaacagggaa
cgtgtggaaaacacgagtcgtcctggagagacacaggtgatgatccagaacctgatgcca
gagacagtttatgtgttccgggtcgtggcccagaacaggcacggccccggcgagagctcg
gcgccgctcaaggtggcaacgcagcccgaggtccagctgcctggccctgctcccaacatc
cgtgccttccccagctcccccacctccatcactgtcagctgggagactccgctctcgggc
aacggggacatccagaactacaaactctactacatggagaaagggcagcacacggagcag
gacgtggacgtggggggcctgtcccacacagtgacggggctgaagaagttcaccgagtac
agcttccgcgtggtcgcctacaacaaacacggccctggcgtctccacccacgacgtcgtg
gtccggaccctgtcagacgtccccagtgctccaccgcagaatttaacactggaggtacgg
aattccaagagcatcctgctgcagtggcagccccctcctgctgggacccacagcgggcaa
atcacaggatacaaaatccgctaccggaaagtttcccgcaagagcgatgtcaccgagagc
gtggggggcacccagctctcccagctcatcgaagggctggagcgcggtaccgagtacagc
ttccgcgtggccgccatgaccgtcaatggcaccggccccgccacggactgggtgtcagct
gagaccttcgagagcgacctggatgagagccgcgtgcccgaggttcccagctccctgcac
gtgcggccgctggtcaccagcatcgtggtgagctggacccctcccgagaaccaggacgtg
gtggtcaggggctacgccatcggctacggcatcggcagcccccacgcccagaccgtcaag
gtggactacaaacagagatactacaccattgagaacctggatcccagctcccactacgtg
ataaccctgaaagccttcaacaacgtgggggaagggatccccctgtacgagagtgctgtg
acccggccccactccgacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgcccccggtgggagttcaggcttccatcctgagc
catgacaccatccggatcacttgggcagacaactccctgcccaagaaccagaagatcacg
gacgcgcggttctataccatccgctggaaaaccaacatccctgccaacaccaagtacaag
actgcaaatgccaccactctgagctatctggtgacagggctgaagccaaacaccctctat
gagttctcggtgatggtgaccaagggcaggagatccagcacctggagcatgacagcacat
gggacaacctttgaattagtgccaacctcaccccccaaggacgtgactgtggtgagcaag
gagggcaagccccgcaccatcatcgtgaactggcagccgccctctgaggccaacggcaaa
atcacagggtacatcatctactacagcacggacgtcaacgccgagatccacgactgggtc
atcgagcccgtggtgggcaacaggctcacgcaccagatccaggagctcaccctggacacc
ccctacttcttcaagatccaggcccgcaactccaagggcatggggcccatgtccgaggcc
gtgcagttccgcacccccaaagctgagtcctcagataaaatgcccaatgaccaagcctcg
ggatctgctgggaaggggagtcgccccgtggacttgggcccggactacaaaccccccctg
ggaggcagtaacagtccccatggcagccccacgtcccccctggacagcaacatgctgctg
gtgatcatcgtgtccgtgggcgtcatcaccattgtcatcgtcgtcatcgtcgccgtcttc
tgcacccgccgcaccacgtcccaccagaaaaagaaacgagctgcctgcaaatctgtgaat
ggctcccacaagtacaaggggaactccaaagatgtcaaacctccagacctttggatccat
cacgagaggctggagctcaaacccattgataaatccccagatcctaatcccatcatgaca
gacaccccgatccctcgcaactcccaggacatcacccccgtggacaattccatggatagc
aatatccatcaaaggcggaattcctacagaggacacgagtcagaggacagcatgtccacc
ctggcgggaaggaggggcatgaggcccaagatgatgatgccttttgattctcagccacct
cagcctgtgattagtgcccatcccatccattccctcgacccccctcaccaccatttccac
tccggcagcctcgcctctccaacccgcagcttcctgcaccaccagctcagcccgtggccc
ctgggctctgccatgtcccattcggacagggccgactccacagagtctgtccggaacacg
cccagcacggacacgatgccggcggcctcggccgtgcccggcgcggagctgccggagccc
gaggggcccttcgtgccctcagaggaggagccccagggcccccccacagcccacgtgcgc
ccctcgcaccccctcaagagcttcgccgtgcccgccgtgccctccgccgggggccccttc
gaccctgccctgccgagcacccccctgctgacacagcaagctcccggccaccccatccac
gcggtgaagacggcgtccatcggcaccttgggcaggactcggccgcccatgcctgtggtg
gtgcccagcgcccccgaggtgcaggagaccacacggatgctggaggactcggagagtagc
tacgagccggacgagctgaccaaagaaatggcccacctggaaggactcatgaaggacctc
aacgccatcaccacggcgtga
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