Cinclus cinclus (white-throated dipper): 134049076
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Entry
134049076 CDS
T10813
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134049076 (DENND4A)
Membrane trafficking [BR:
ccic04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134049076 (DENND4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
134049076
NCBI-ProteinID:
XP_062357254
LinkDB
All DBs
Position
13:complement(19588561..19637774)
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AA seq
1877 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDVSKPLEEEIHFNDACHKMAKPKEPITDVTVLNKTLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQMYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
STPYGHLANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
DTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIH
SLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDPP
PDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLSTLYQQLAELQQRPREDAFME
LAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFEL
QGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGETR
LIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLELFERPEGFLTAPNNK
LSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAGI
DPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTAHTSVP
GGLSDTANNTSLKEEAKQEKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLNYQ
NSRNDKATSSIVRLNGTIDNTVAEGSRESAVGLLFTSSFEDANEAEVRKSKSLRKRHKSA
VEADLREMPWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADAKILSSALQKSIRP
KTLNIRSSSLESKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETPTSVKNS
SEKSKRLQRKSSFLVKPVEKTDVETGFDPLSLLVAETEQQKEEEEEEDDRSVSTPSARRD
LAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNANKRSPTIIQPCRRSSLPPNSPRPPSL
TKSKSYHSKNEERPRDRLWSSPAYSPNSPAKEQPQDTASALTLVSSPSFNLDTLLTPKFD
VLKSSMFSAGKGVAEKASKWYSKFAMYAASAKDQNSDRASVSSLGALDSESTSLTDEDAC
NDFESASPQENTTSEIKGISISKTSLESSASHDSSAKQFDQCGSLSKFPLPDKSELVSSC
STSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPF
LSIEIRDLRRPGRYFLKSSPSTENMQFPSLFSSQSGKSCNTTATVGLTTSLMSVQEDINS
NSKSKQHDNIYARSIQIPSGRRQNAPGSECTSHPVARSISTFGPLEEDEKENQKISHIIP
TGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFVD
HHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRTCMSEDSKYVLIQMLWDNMK
LHQDPRQPLYILWNAQTQKYPMVQLLQKDDDSFNQELLRSMVKSIKMNDVYGPMSQILER
LNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQVKNTHNCDRP
PSTGVMECRKIFGEPYL
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggcccgtgtcgctgattacttcgttgtcgcaggactaacggatgtc
tcgaagccactggaggaggagatccacttcaacgatgcctgccataaaatggccaaacca
aaagagcccatcacagatgtgacagtccttaataaaaccctgggggaggaggttcctcag
ggctataaatgcatagatgtcactccctcgggcctgtctgcagatctcaataatggcagc
cttgtaggaccccagatgtacctttgttatcggcgagggagggataagcctccacttact
gatttgggggttttatatgacgggaaggaaagagtaaagcaaggctgtgaaatcattcag
agcaccccgtatgggcaccttgccaacatcagcggcagcgcctcgtcccagcgggtgtac
atcacctaccgcagagcctctgagaacatgacccagaacaccctggctgtcacagacatc
tgcatcatcatccccagcaaaggagagactcctccacacaccttctgcaaggtggacaag
aatctgaataatagcatgtggggctcagcagtatatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatacaaggctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctccctatgggtgcaacaatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactctatcctgaa
gagaacctcacagagaaacaaaaatctcagctgggattagcagctgctgtcgagggaaaa
gacacgtgcagaacagtgcagacaaataaatgcatctgtctgctctctcactggcctttc
tttgatgctttcaagaaatttcttacctttctgtatcgttactccatttctgggccacac
gtcctccccattgagaaacacatttcccatttcatgcataaagtaccgtttccatcccct
cagaggccaagaattcttgtgcagctatctccacatgataacctgattcttagccagcct
gtgtcatcaccacttccattgagtggtggcaagttttctacactacttcagaatttagga
cctgaaaatgcagtaactctgctggtgtttgctgtgacagagcataaaatcctcatccac
tcattgcgaccttctgtcctcacgagtgtgacagaggcattggtctctatgatatttcct
ttccactggccttgcccatatattcctctgtgtcccttggcactggcagatgtgctgagt
gccccgtgcccgttcatagtgggaattgattccagatactttgatctctatgacccccca
cctgatgtcagctgtgttgacctggataccaacacaatttctcaaactggagacaagaaa
gctattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacacattaagt
actttatatcagcagctggcagaattgcaacagcgaccaagagaagatgcattcatggaa
ttagcaatgaatgattatgattttaattctgggaagaaattgcatctgttagatttggag
atccaggaagcatttctctgtttcatggcttcaatcctaaaaggttacaggtcttatctc
aggccaataacggaggcgccctctgaaacagccacagatgcaagttctctctttgaacta
caagggttcctgaagagcagagaccgttcccatcagaagttctacaccctgatgaccaaa
acccagatgttcattcgcttcattgaggaatgctcttttgtcagtgacaaggatgccagc
cttgccttctttgatgactgtgtggataaagtagatatggacaaaactggggaaaccaga
cttatagagctggatgagtcctacaagagtgagcacacagttttcataacaccccctgag
atccctcatctgccaaacggggaagaacaccctctacaatacagctataatggatttcca
gtattaaagcttgaactgtttgaacgacctgaaggatttcttacagcaccaaataacaaa
ctgtcctcaaaagccagtagccccaacagcccatcaccaatgttcagaagaactaaacag
gaaattaaatctgcccacaaaattgcaaagaagtactcctccatcccccagatgtggtcc
aggtgtttgctccgtcactgctatggcctttggttcatctgcctccctgcctatgtgaaa
gtctgccactccaaagtcagggctctgagaactgcctacgatgtgctacagaaaatgcac
accaaaaaaatagatccacctgatgaggtgtgctacagggtcctcatgcagctgtgtggg
cagtatgggcagcctgtgctggcagtcagggtgctctttgaaatgcagaaggctggcatc
gaccccaatgccatcacctacggctactacaacaaggctgttttggaaagcacctggcct
tcaagcaatcgaggtggctatttcctctggatgaaaatacgaaatgttgtcttaggaata
gcacagtttaaaaaagcattgaaaaagctaccagcaagcactgcgcatacatctgttcct
gggggactttcagacactgccaataacacatcactcaaagaagaagccaagcaagagaaa
acttgtcttcaagacatccaagaacaaaaggaggacaagagagagagtgactccagttct
ctgtctgaagtggagagcacaaaagggagtggggactgcctgcccaaactgaactaccag
aactccaggaatgacaaagccacttccagcatcgtgcggctcaacggcaccattgacaat
accgtggcagaagggagcagggagagtgctgtaggattgttgtttacatcatcttttgag
gatgccaatgaagcagaagttagaaaaagtaaatccttaagaaagagacataaaagtgca
gtggaagctgacttaagggagatgccatgggagagcaggaacaggaacctgagtggagat
ggcttagtgggactcatgataaacagaatcaaccaggaggcaaaccctggagaaatcgtt
gaaaaactgggagctgatgccaaaattctctctagtgcattacagaaaagcataaggcca
aaaactcttaatatcagatcttcctctttggagtcgaagagagaaagcctggagaaagaa
tccagtgatgaagatgcagcctttgattgcagttttacagataaaacagaatctcctgtt
atttttgatctggaagacctggatgcagaacctgaaacacctacatcagtgaaaaattcc
agtgaaaaatccaaaaggttgcaaagaaagagcagctttctagtaaagccagttgaaaaa
acagatgttgaaactggatttgatccattgtctctgctggttgctgagacagagcagcag
aaggaggaggaggaggaggaggatgacagaagtgtttcgactccatctgccagaagagat
ttagctgaagaaatagtcatgtacatgaacaacatgagcagccctttgtccagtcgtgcc
ccaagcattgagctgcaaaaaccctttgatgacagaaatgcaaataaaaggagcccaacc
attatccagccttgtaggaggtccagccttcccccgaactccccaaggccacccagtctt
accaaatccaagagctaccactcaaaaaatgaagaaaggccaagggacagactttggtct
tccccagcttattccccaaacagcccagccaaggagcagccccaggacacagccagtgca
ttgacacttgtgtcatcaccatcgttcaacttggacacactgctaactcccaagtttgat
gtcctgaaaagcagcatgttttctgctggaaaaggggtcgcagagaaagcgagcaagtgg
tactccaaatttgcaatgtatgctgcatctgcaaaggatcaaaattcagaccgagcaagt
gtttcatctcttggagctctggactcagaatctacttctctcactgatgaagatgcttgc
aatgattttgaaagtgcttctcctcaggagaacaccacatcagaaattaagggaattagc
atcagcaagacaagcctggaaagctcagcttcccatgatagttcagctaagcaatttgac
cagtgtggttctctttccaagttccctttacctgacaaatcagagttggtgtcttcctgc
agcaccagcagtaccagtgtgttccagaactacgccatggaggtcctcatctcgagctgt
tctcggtgtcggacttgtgactgtttggttcacgatgaagaaatcatggcaggctggaca
gcagatgattcaaatctcaataccacatgtcccttctgtggcaatttatttctgcctttt
ttaagcatagaaatccgagatcttcggcggcctggacggtattttctgaagtcaagccct
tctacagaaaatatgcagttcccatcccttttctccagtcagagtgggaagtcctgcaac
accacagccactgtaggcctcactacatctctgatgtctgtccaagaggacatcaattca
aatagcaaatctaagcagcatgacaatatttatgccagaagtatccagatcccctcagga
agaagacaaaatgcccctgggtcagaatgtacgagtcaccctgtagcaaggagcatcagt
acatttggtcctttggaagaagatgagaaggaaaaccagaagatcagccatatcattcct
actggtagcctgcctgctactttgcaaggaccaacagattccttgggcctggagtggcgc
ttgcctagtcctgatcctataacggttccttacctcagtcctcttgtggtgtggaaagag
cttgaaagcttacttgaaaatgaaggggatcatgcaataacggtagcagactttgtagat
catcatcccattgtgttctggaatttggtgtggtatttcaggcgcttggacttgcccagc
aacttaccaggattaatactttcttctgagcactgcaataagaactccaagattccacgg
acctgtatgtcagaggacagtaaatatgttcttattcagatgctatgggacaatatgaaa
ttgcatcaggatccgaggcagcctctgtacattctctggaatgctcagacccagaagtac
ccaatggtccagttattgcaaaaagatgatgactcctttaaccaggagctcttgaggagt
atggtgaaaagcattaaaatgaatgatgtgtatggaccaatgagtcagatactggagagg
ctcaacaagtggccacatattaaaagacagaggagcctttacagagaaatactgtttctt
tcacttgttgccctgggaagagataacattgatatagatgcttttgacagagagtacaaa
atggcctatgatcgtctcactgctaatcaagtgaagaacactcataactgcgatagacca
ccaagcactggagtgatggaatgcagaaagatttttggagaaccatatctttaa
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integrated database retrieval system
