Cinclus cinclus (white-throated dipper): 134049112
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Entry
134049112 CDS
T10813
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134049112 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccic03310
]
134049112 (RORA)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134049112 (RORA)
Nuclear receptors [BR:
ccic03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134049112 (RORA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134049112
NCBI-ProteinID:
XP_062357304
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Position
13:5571093..5928274
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AA seq
526 aa
AA seq
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MESAPAAPDPAASEPGSSVSEAAAGARDTPVNLEPARKSDAPAPVRRQSYSSSSRGSRGI
SVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI
DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPG
EAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDIN
GIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQ
ITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTE
DEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTL
RALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggctccggcagcccccgatccagcagccagtgagccgggcagcagcgtctcc
gaggcggccgccggcgccagggacaccccggtgaacctggagcctgcccggaaaagcgat
gcgccggctcccgtccgcaggcagagctactccagcagcagcagaggaagtcgtggtatt
tctgtaacaaagaagactcatacatctcaaattgaaattattccatgcaagatctgtgga
gacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggttttttc
agaaggagtcagcagagcaatgccacgtactcgtgtcctcggcagaagaactgtctgatc
gaccggaccagtcggaaccgctgccagcactgtcgcttacagaaatgccttgctgtgggg
atgtctcgggacgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagcctgtac
gccgaggtgcagaaacaccgaatgcagcagcagcagcgggatcaccagcagcagccagga
gaggcagaaccactcacaccaacatacaatatcaccaccaatgggttaacagagctacat
gacgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagactctgca
gttagcagcttctacttagacatacagccttctccagatcagtcgggtcttgatattaat
ggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttcccttattgt
tcttttacaaatggggagacctctccaactgtgtccatggcagaattagagcatcttgca
cagaatatttccaagtcacacatggaaacttgccagtacttgagagaagagttacagcag
ataacatggcagactttcctgcaggaagaaattgagaactatcagaacaagcaaagggag
gtaatgtggcagttatgtgcagtcaaaataacagaagctatacagtatgtagtggaattt
gccaaacgcattgatggctttatggaactgtgtcaaaacgatcaaattgtgcttttaaaa
gcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccagaacaac
acagtctactttgatggcaagtatgctagcccagaggttttcaagtccttaggttgtgaa
gacttcattagctttgtgtttgaatttggaaaaagtttatgttctatgcacctgacggaa
gatgaaatagctctgttttctgcgtttgttttaatgtcagcagatcgctcatggcttcag
gagaaagtaaaaattgaaaaactccagcagaagatccagctagcacttcagcatgtccta
cagaagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtctacttta
agagcactgtgtggacgacatacagaaaagctaatggcatttaaagcaatatacccagac
attgtgcgacttcattttcctccactttacaaggagttgttcacttcagagtttgagcca
gcaatgcaaattgatgggtaa
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