Cinclus cinclus (white-throated dipper): 134049145
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Entry
134049145 CDS
T10813
Name
(RefSeq) desmoglein-1-like
KO
K07599
desmoglein 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134049145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134049145
Cell adhesion molecules [BR:
ccic04515
]
Cadherins
Major cadherins
134049145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
134049145
NCBI-ProteinID:
XP_062357351
LinkDB
All DBs
Position
1:108554155..108575178
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AA seq
1170 aa
AA seq
DB search
MDWLPHRTAAFLFLLLVLLDFSTGFHVEVKEWAENGTARWKTFRRQKREWIKFAAACREG
EDNSKRNPIARIRSDCEEDNPITYSISGVGIDRAPYGIFVVNPRTGEINITSIVDREVTP
VFVIRCFAKHSVTGVDLEPPLELRVRVLDINDNPPVFAQTVFTGSVEESSMDNTLVMKII
ATDADEPNHLNSKIAFKIESQEPSGPPMFIMNKYTGELHLANYLDREQHSSYTLVVKASD
RDGAADGISSLCSCNVKVIDVNDNFPTLAQSSFSASISENSLSSELLRIQALDADEEFTD
NWLAEFFFITGNEDNCFEIVTDRATNQGILRVIKELDFEHIRTHSLMIGVRNVAAFHHSV
AHEYQIFGTPLTVEVKNLIEPPRFHPSSVVFSLAEGARVNYVVGTYTAMDEDTRTIASNV
VYSIGRDPAAWFRINQNTGEITLNKVISRDSVYVVNGQYQAEVLAITRGVPRYTATGTIV
LSIDGINANCPSINTEMRKVCMHSPSVIISAKHRDGDLYATPFTFSIHGEPQTTWIIRRI
NDSSAELVGQNIDFYLYRIYVVVRDSQGRRCARPHIIPVQACQCDSRNYCTSGATRIIII
GGGGSGGGTGGGTGGGTTGGGGGGTGGGGREDGGGDYGQTRPGGGDFEDHTDWQGYTDGY
DGGEEGYTASTDDGYGNENYGRQYESNTTLSGAAIGLMFLGGLIFVLIPILMSMSDCCGC
GPGAAGGVGTGFEPVPECTEGAIHPWGIEGAQPEDRDVSHILAPTTAAGGDFGEPSDIYN
NTYGGGGGVASGVEETTGVGYGTGTGYGTAGGISGTGEAKGSIGGTIKEYREGGVNMAFL
DNYFSEKAFVYADEDEGRPANDCLLIYDHEGVGTPVGSVGCCSFIGEDTDETYLDTLGPK
FKTLAEICLGKEIEPFPDVNPPWPGVVNIPFPSPESDLNLPPPGTTIVVNGNAPMPPPVG
TTTVVTENTYTSGTTIQPPRPMPDPLLHGNMTVTETYTSGSPSLCVDPLRASNVVVTERV
VGPASASELRGMLDIPDLTEGSNVIVTERVIAPNSRLPASLSIPDLVDGSNVVVTERVFR
PASGMPGSLINIPSELSNAHNVVVTERVVSGSGMSSLGGTSLGGANLGGLSSTGQMLSAD
CHLGQGMGTASPGTSRRRVTKYSTMQYSSQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccctcaccgaacggctgcttttctgttccttttgttggtactcttggat
ttcagcacaggatttcatgtagaggtaaaagaatgggctgaaaatggaacagcaagatgg
aaaacctttagaagacaaaaacgtgaatggatcaaatttgctgcagcttgtagagaagga
gaagataattccaagaggaatccaattgccagaatccgatctgattgtgaagaagacaat
ccaatcacatacagcatctctggagttggaattgatcgtgcaccctatggaatatttgtt
gttaacccaagaacaggagaaattaatataacatcaatagtggatagggaagtaacacca
gtatttgttatacgttgctttgctaagcactcagtgaccggtgtagatttggaaccgcct
cttgaacttcgagtcagagtcctggatataaatgataaccctcctgtatttgcacaaact
gtatttacaggatctgttgaagagagcagcatggacaacacactggtgatgaaaatcatt
gcaacggatgcagatgaacctaaccatttgaattctaaaattgccttcaaaatagagagt
caggaaccttctggtccacccatgttcattatgaataaatacacaggagaactccatctt
gcaaattaccttgacagagagcaacatagtagttacactctggttgtgaaggcatcagac
cgggatggggctgcagatggaatatcatccctttgtagctgtaacgtgaaagttattgat
gttaatgacaactttccaactcttgctcagagctctttttcagcaagtatttcagaaaat
tcactcagttcagaactgctacgaatacaagctctggatgctgatgaagagtttacagac
aattggttagcagagtttttctttataaccggtaatgaagataactgttttgaaattgtt
acagatcgagctacaaatcaaggaattcttagagtaattaaggaactggattttgaacat
atccgaactcactcactgatgattggcgtcaggaatgtagctgccttccaccactctgtt
gcacatgagtaccaaatatttggaacacctctcacagtagaagtaaaaaatttgattgaa
ccaccaagatttcatccatcttcagttgtgttttccctggcagaaggtgcacgagtgaat
tatgttgtaggaacatacacagccatggatgaggacactagaactattgcatcaaatgtt
gtatatagtataggacgtgatccagctgcctggttcagaatcaatcaaaacactggtgaa
atcacactgaacaaagttattagccgggattcagtctacgtagtcaatgggcagtaccaa
gcagaggttctggctatcaccagaggggttcctcgatatactgctactggcaccattgta
ctttcaatagatggcatcaatgccaattgcccaagtattaatactgaaatgaggaaagta
tgtatgcattccccatcggtgattatctcagcaaagcatagggatggtgatctctatgct
accccctttacattcagcatacatggtgaacctcagactacatggattatcagacgaata
aatgattcttctgcagaactagtgggacagaacatagacttttacctttataggatctat
gtcgttgtaagagatagccaaggccggcgctgtgctagaccacacataattcctgtgcaa
gcctgccagtgtgatagtcggaattactgcaccagtggggccacgagaataattatcatc
ggtggtggtggctctggtggtggcactggtggtggcactggtggtggcactactggtggt
ggtggtggcggtactggtggaggaggccgggaagacggtggtggtgactatggccagact
agacctggaggaggagattttgaggaccacacagactggcagggttatactgatggctac
gacggaggtgaggaaggatatactgcctcgactgatgatggttatggaaatgaaaattat
ggcagacaatacgaatcaaacaccacacttagtggtgctgccattggcctgatgtttctc
ggtggattaatatttgttttgattccaattttgatgtcaatgagtgactgttgtggctgt
ggacctggcgctgcaggtggagttggaactggatttgaacctgtacctgaatgcacagaa
ggggcaattcatccatggggaatagaaggcgcacagcctgaagacagggatgtctcgcac
attcttgccccaacaactgcagcaggaggtgattttggtgaaccttctgacatatataat
aacacatatggaggaggaggaggagtagcttctggtgttgaagaaactacaggtgttggc
tatggcactggtacaggctacggaacagctggaggaatttctggaacgggggaagcaaaa
ggttcaattggaggaacaataaaagagtatcgagaaggaggagtgaacatggccttccta
gacaattatttctctgagaaagcatttgtgtatgcagatgaagatgaaggtcggccggca
aatgactgcctattaatttatgatcatgaaggagtcggtactcctgttggctctgtgggt
tgctgcagctttattggagaagatacagatgaaacatatttggatactttaggaccaaaa
tttaagaccctagcagagatctgtcttggcaaagagattgaacctttccctgatgtcaac
ccaccctggccaggtgtcgtcaacattcccttccccagccctgaaagtgatctaaacctc
ccgccacctggcaccaccatcgttgtcaatggaaatgcacccatgcctccccccgttggc
actacaacggttgttactgaaaacacctacacgtctgggacaaccatacagcccccaagg
ccaatgccggatcccttgctccatggcaacatgacggtgaccgaaacctacacctccggc
tccccctctctttgtgttgaccctctgcgtgcatccaacgtcgttgtgacagagagggtt
gtcgggcccgcatctgcctctgaattgcgtggcatgcttgatatccccgatctcacagag
ggctccaacgttatcgtcacggaaagagtaatcgcgcctaactcccgactcccggcatct
ctgagcattcctgatttggtagatgggtccaatgtggtagtgacagaaagggtgttcagg
cctgcctctggcatgccgggcagcctaataaatattccctcagagttatccaatgcccac
aacgtggtggtcacagagagagtagtgtcagggtctgggatgagtagcctgggaggaaca
agcctaggaggagcaaatctggggggtctgagcagcacgggtcagatgctcagtgctgac
tgtcatcttggccagggaatgggcacagcatctccaggcacctcccggaggcgagtgaca
aagtacagcaccatgcagtactccagtcagtaa
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