Cinclus cinclus (white-throated dipper): 134049180
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Entry
134049180 CDS
T10813
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134049180 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134049180 (TMC3)
03037 Cilium and associated proteins [BR:
ccic03037
]
134049180 (TMC3)
Transporters [BR:
ccic02000
]
Other transporters
Pores ion channels [TC:
1
]
134049180 (TMC3)
Cilium and associated proteins [BR:
ccic03037
]
Other cilia and associated proteins
Stereociliary proteins
134049180 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TMEM43
Motif
Other DBs
NCBI-GeneID:
134049180
NCBI-ProteinID:
XP_062357401
LinkDB
All DBs
Position
13:13137197..13158192
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AA seq
1114 aa
AA seq
DB search
MAAAPGSPALRAAKSCKKQRTVKRQTGIYTYQEPPHSNSDDDTGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTVSKTIPKEHIASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKNKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNNSANNSTTSLATNTLSKDDNLTIPSVQIKRNGFVTLEEHRTQGLT
VSDSLINQTISFNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRYLS
DCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSW
AVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIY
DIVSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRMKI
QTERTEDKKKVVQMAVARIQNLDASDKRPEQETDIMSQESSVRSSTPRKNGSVLNFESPV
SKGTRIQTISQSVPQAVPSTDVRPANATPTTSTSLTPAPSVSSVQKPRNDHITNRYPSVV
HRSTSELCKTKPYTPVTFKKPTEDVHSDPLFRKAIRQVNSDALGAGAPVFLGCRPYATRY
FLVNENESRKKSLRSTSRLQRHFRKEESGDIIELYPRHIRRYVVQTPHQTYSPHPSEDEE
DEEELEREFMNRSHRPRSLSDLRPAPRFYIGDRADGHILMRKDLARVHYKSWDDGFELDL
DRPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVIHTK
DKYPKSGAKLTKKKSKNSVDPSMSEPSELVCSNV
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgcccggctcccctgcgctcagagctgccaagtcctgcaagaagcagcgc
acggtcaagaggcaaaccggcatctacacctaccaggagccgccccacagcaactcggat
gatgacactggtgaagagaaggctgagagccacgacccagagcagatctttcagaacatc
cagtaccagaaggagattatgtccaatatccgctgccggccgtggccgatgaggcagaag
ctgagggcactcaggcaggcgaaggagatcgtgctcaagtacgaagggaggctcacgaga
acgagaggttaccaggctgctggggcagagctttggaagaagtttattcgacttgcatat
aattttgtggtaatctttattccttgggaaatgagaataaagaaaattgagagtcatttt
gggtctggagttgcctcttacttcatcttcctgagatggctgtttggaatcaatattgtc
cttaccataatgacaggagcatttgtagtcctcccagagctcctggccggagccccgttt
ggcagcacagtcagcaagaccattcccaaggagcacattgcatctgctcaagacctggac
accatctggtcactggggggctatctccagtactctgttttgttttatggctattatggt
cgtgacaggaagattgggaaagctggataccgtctgcctcttgcctacttccttgtagga
atggctgtgtttgcttacagtttcatcattcttctaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgctggagactgttctgtgct
tgggactatttgataggaaaccctgaggctgcagagagcaaagctgctgccatagtcaac
agcatcagggaagctatactggaagagcaggagaagaagaaaaacaaaaacttggcagtg
accataagcttaagaattattgcaaacatcctcgtgcttctctcccttgcgggaagtatt
tacatcatctactttgttgtggatcgatcccaaaggttagagcgcaccaaaaaggaattg
actctttgggaaaaaaatgaggtcagcgtagttgtgtcactgatcacaatgattgcaccc
tctgcttttgaacttgtggcagccctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgtcctatacctgggaaatctctacagtttaatcattgctctc
ctggataaagtggacagtatgagtgtcactgactctgatgtgaacaacagtgcaaataat
tctaccacctccttagcaaccaacactctttctaaggatgacaatttaaccattcctagt
gtacaaattaagagaaatggctttgtcacattggaagagcatcgcacccaaggcctgaca
gtctcagactcactgataaaccaaacaatttcctttaatacccagaacccacaggatcag
tgctgggagacatatgttggtcaagagatgctcaagctttcaattatcgacatgattttc
acagttgcaagcatcctcctaattgattttttccgtggactgtgtgtccgatacttgagt
gattgctggtgctgggatctggaaagcaagtttccagaatatggagaattcaaaattgca
gagaatgtattacatttggtctacaaccaaggaatgatctggatgggtgctttcttttca
ccttgcttaccagcattcaatgtactcaagttgattggactcatgtacctgaggagctgg
gctgtgctgacgtgcaatgtaccacaccagcaggttttcagagcatctcgatccaataat
ttctacttggccatgctgctgtttatgttgttcttgtgtatgttaccaacaatttttgct
attgcccgatacaagccatccttaagctgtggcccattcagtggtcaagaaaaaatatat
gatattgtttccgaaacaattcaaaatgattttcccacatggttcaacacagtgattact
tacatcagcagtcctgtggttgtcctccctgcactactactgttattcatgctaatctac
tacctacagagtattgcaagatcattaaaattcaccaacaatcaactgagaatgaagata
caaacagaaagaactgaagataagaaaaaggtggttcagatggcagtagccagaatccaa
aatctggatgctagtgacaaaagaccagagcaagaaactgatattatgagccaggagtcc
tctgttcggtcctcaacaccccgaaagaatggcagtgtcttgaactttgaatctcctgtg
agcaaaggcaccagaatacaaaccatttcccagtctgtgccccaagctgtgccatcaact
gatgtgagacctgccaacgcaactcccacaacttcaacctctttaacaccagctccctct
gtgtcaagtgtacagaaaccaagaaatgatcatatcacaaacagatatccaagtgttgtt
cataggagcacaagtgagctgtgcaaaacaaagccctacacaccagtgactttcaaaaag
cccactgaagatgttcattctgaccctcttttcagaaaagccattcggcaggtaaattcg
gatgccctcggggctggagctcctgtatttttgggatgtagaccatatgctaccaggtat
tttctggttaatgaaaatgagtcccgcaaaaaatcgctccgttctacctcccgactccaa
aggcatttcagaaaggaggaatcaggagacatcattgagttgtatccacgccacatcaga
agatacgtggttcaaacaccacaccagacgtattcccctcaccccagtgaagatgaagag
gatgaagaggaacttgagagagaattcatgaacagatcccatcgccctcgctcactgtct
gaccttcgcccagcaccacggttttacattggggatcgtgctgatggccatattctaatg
agaaaagatctagccagagtgcattacaaatcctgggatgatggttttgagctggacctg
gacaggcctccatatgcttacaagaaagtacacctgaactatcctgagccacgtgtgaag
ccaaaatcaaagcaaaagctggagcaatctctaacagagtctgattccatttccattgaa
tccagcagtgatccgcagaacagcagcaatgaccagtacatccaggtcattcataccaag
gacaagtatccaaaatctggggcaaaactcaccaaaaagaaatctaaaaacagtgttgat
ccaagtatgtctgagcctagtgaactggtgtgctcaaatgtctga
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