Cinclus cinclus (white-throated dipper): 134049250
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Entry
134049250 CDS
T10813
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ccic01100
Metabolic pathways
Module
ccic_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134049250 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccic01003
]
134049250 (CHSY1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
134049250 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
134049250 (CHSY1)
Glycosyltransferases [BR:
ccic01003
]
Glycan extension
O-Glycan
134049250 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
134049250
NCBI-ProteinID:
XP_062357518
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All DBs
Position
13:complement(18976613..19049794)
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AA seq
786 aa
AA seq
DB search
MAGRGRRAWLSVLLGLVLGFVLASRLVLPRASELAAAARPHRARPQGCRPPPAAAAAAPP
RRPGPPAQSFLFVGVMTAQKYLRSRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPL
PGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFL
GQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVG
RCVRRFAGVQCVWSYEMQQLFYENYEKNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLH
SYMLSRKIAELRHRTVQLHREIVLMSKYSNTEIHKEDLQLGMPPSFMRFQPHHREEILEW
EFLTGKYLYSGADGQPPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGY
RRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDAKELASK
INQDSGSLSFLSNSLKMFVPFQLGRSKAERKELKDKKINILIPLSGRFDMFARFMGNFEK
TCLIPNQNVKLVVLLFNSNSNPDKAKQIELMRDYRSKYPKADMQVLPVSGEFSRALALEV
GSSQFQNESLLFFCDVDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSD
NHFAFTQKTGFWRNYGFGITCIYKGDLLRAGGFDVSIQGWGLEDVDLFNKVIQAGLKTFR
SQEIGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTN
GSVRTA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggccgccgcgcctggctcagcgtcctgctggggctggtgctgggcttc
gtgctcgcatcgcgcctcgtcctgccccgcgcctccgagctggcggcggcggcgcggccc
caccgagcccgcccgcagggctgccgcccgccgcccgccgccgccgccgccgccccgccg
cgccgccccggcccgccggcacagagcttcctcttcgtgggggtcatgacggcgcagaag
tacctgcggagccgcgcagtggccgcgcaccgaacgtggtccaaaaccattcctggcaag
gtcgaattcttctccagcgagggttcggacacctctatccccatccccatcgtgccactt
ccaggtgtagatgactcctacccaccccagaagaaatccttcatgatgctcaaatacatg
catgaccactacttggacaaatacgaatggtttatgagggctgatgacgacgtttacatc
aaaggggacaaactggagaacttcctcaggagcctgaacagcagcgagccgctgttcctg
gggcagaccggcctcggcaccacggaggagatggggaagctggcgctggagccgggtgag
aacttctgcatgggggggccaggagtgatcatgagccgggaggtgctgcggaggatggtg
ccccacatcggcgagtgcctgcgggagatgtacaccacccacgaggacgtggaggtggga
cggtgcgtgaggaggttcgcaggggtgcagtgtgtctggtcctacgagatgcagcagctg
ttctacgagaattacgagaagaacaaaaaaggctacatccgagacctgaggaacagcaaa
atccaccgagccataacgctgcaccccaacaagaaccccccgtaccagtacaggctgcac
agctacatgctgagccgcaagatcgccgagctgcgccaccgcaccgtgcagctgcaccgc
gagatcgtgctcatgagcaagtacagcaacaccgaaatccacaaggaggacctgcagctg
gggatgcccccctccttcatgcggttccagccccaccaccgggaggagatcctggagtgg
gagtttctcacaggaaaatatttgtattcgggtgccgacgggcagccgcctcggagaggg
atggactcgtcccagcgcgaggcgttggatgacatcgtgatgcaggtcatggaaatgatc
aatgccaatgccaagacacgggggagaatcattgatttcaaggaaatacagtatgggtac
cgcagggtgaaccccatgtacggagcagagtatgtgctggacctgctgctcctctacaag
aagcacaaggggaagaagatgacggtccccgtgagaaggcatgcatacctgcagcagacc
ttcagcaagatccagttcatggagcacgaagagatggacgccaaagagctggccagcaaa
atcaaccaggattctgggtccttgtccttcctctccaactcgctgaagatgtttgtcccc
ttccagctcggcaggtccaaagcagagagaaaggagctcaaagacaagaagatcaacatc
ctgatccctctctctggaaggttcgacatgtttgcaaggttcatggggaattttgaaaag
acgtgcctcattccaaaccagaacgtcaagctggttgtcctgcttttcaattccaactcc
aaccctgacaaggccaagcagattgagctgatgagagattaccgctccaaataccccaag
gctgacatgcaggttctgccggtgtcgggggagttctcaagggcactggctctggaagtt
ggatcttctcagttccagaatgagtctttacttttcttctgtgatgttgacttagtgttt
accacagaattcctccagcggtgtagagccaatacagttttgggtcagcaagtgtatttt
cccatcatttttagccagtatgatccaaagattgtttatagtggaaaggttcctagtgac
aatcattttgccttcactcagaaaacaggtttctggaggaactatggctttggtatcacc
tgtatttacaaaggtgaccttcttcgagcgggtggctttgatgtctccatccaaggttgg
ggccttgaagatgtagatctgtttaacaaagtcattcaagctggcttaaaaactttcaga
agccaagaaattggagtagtccatgtgcatcaccctgttttttgtgaccctaatcttgat
ccaaaacaatataaaatgtgcttggggtccaaagcttcaacttatgggtccacacaacag
ctggctgaaatatggtttgaaaaaaatgacccaaattttgggaaaagcagcaatactaat
ggctcagtgaggacagcctaa
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