Cinclus cinclus (white-throated dipper): 134049282
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Entry
134049282 CDS
T10813
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134049282 (LINGO1)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134049282 (LINGO1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
134049282
NCBI-ProteinID:
XP_062357554
LinkDB
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Position
13:complement(2243784..2258781)
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AA seq
613 aa
AA seq
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MVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPE
GIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLR
SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF
SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEIS
HWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSML
HDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILD
NNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIR
DRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYA
QIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIS
SADAPRKFNMKMI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtagctggggaggcgagtatgcgcagcccaatcctggcctgctggcagccgattctc
ctgctgatgctgggatccatcctgtccggctctgccacaggctgcccgccgcgctgcgag
tgctctgcccaggagcgcgccgtcctgtgccaccgcaagcgattcatggttgtgccagag
gggatccccaccgagaccaggttgctggacttgggcaagaaccgcatcaagacgctcaac
caggatgaatttgccaattaccctcacctggaggagctggagctgaacgagaacattatc
agtgccattgaacctggggctttcaacaatctcttcaacctcaggacgctggggctcagg
agtaacagactcaagctgattcctttgggggtgtttactggactcagcaaccttaccaag
ctagacattagtgagaacaaaattgtgatcctcctagactacatgttccaggacttgtac
aacctgaagtctttggaggtgggggacaacgaccttgtctacatctcccaccgggccttc
agtggcctcaacagcctggagcagctgaccctggagaaatgcaacctgacctccatcccc
acggaggccctgtctcaccttcacggcttgatcgtgctgcggctgcgccatctgaacatc
aacaccatccgggattactcattcaagaggctgtaccggctgaaggtcctcgagatctca
cactggccctacctggatactatgacatccaactgcctctatgggttgaacctgacctcc
ttgtccatcacccactgcaacctgacatccatcccgtatgtgtcagtgaggcacttggtt
tacctccggttcctgaacctgtcctacaaccccatagtcaccatcgagggctcaatgctc
catgacctgctcaggctccaggagattcagctggtgggagggcagctcaccacggtggag
cccttcgccttccgcggcctcaattacctgcgcatcctgaacgtgtcagggaacctgctg
accaccctggaggagtcagctttccactcggtgggcaacctggagacgctcatcctcgac
aacaaccccttagcctgcgactgtcggctgctctgggttttccggcggcgatggcggttg
aacttcaacaagcagcagcccacctgctccacccccgagtttgtccagggcaaggagttc
aaggacttccctgacgtcctcctgcccaactacttcacctgccgccgagcacggataagg
gaccgcaaacctcagcagatctttgtggacgaaggccacacggtgcattttgtctgccgg
gcagatggggacccgccacccaccatcatgtggctctctccccggaagcacctcatctct
accaaaaccaacgggcggctcactgtcttccctgacggcacgctggaggtgcgctacgcc
cagatccaggacaatggcacctacctatgcattgccagcaacgcaggtggcaacgacacc
atgctggcccacctgcatgtgcgcagctactccccagactggccccaccagcccaacaag
accttcgcattcatctccaaccagcccaatgagagcgatgccaacagcacgcgcgccacc
gtgcctttcccctttgacatcaagactctcatcatcgccaccaccatgggcttcatctcc
ttcctgggcgttgtgctcttctgtctggtgctcctcttcctgtggagccgtgggaaaggc
aacaccaagcacaatattgaaatcgagtacgtgccacgcaagtccgatgcgggcatcagc
tctgccgacgcgccgcgcaagttcaatatgaaaatgatttag
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