Cinclus cinclus (white-throated dipper): 134049363
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Entry
134049363 CDS
T10813
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04137
Mitophagy - animal
ccic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134049363 (USP8)
04137 Mitophagy - animal
134049363 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccic01002
]
134049363 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134049363 (USP8)
04121 Ubiquitin system [BR:
ccic04121
]
134049363 (USP8)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134049363 (USP8)
Peptidases and inhibitors [BR:
ccic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134049363 (USP8)
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Others
Others
134049363 (USP8)
Ubiquitin system [BR:
ccic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134049363 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
134049363
NCBI-ProteinID:
XP_062357730
LinkDB
All DBs
Position
13:complement(11837432..11858484)
Genome browser
AA seq
1119 aa
AA seq
DB search
MPAVASVPKELYLSTSLKDLNKKTEVKPEKTSTKSYVQSALKIFKAAEESRLDRDEEKAY
ILYMKYVAVYNLIRKRPDFKQQQDYFHSILGPTNLKKALDEAEILSDSLKLRYEEAEVRK
KLEERDRQELQKKQEPKDDGKSSAKNSSESAVDSKGKSQRTNGETKHSLERKDQSDSLSG
AVTPEKLFAMMSDKNIELLIMDARRLKDYQESCIPKSISVPEEAIRPGDTANLIEARLPE
DSRDAWKRRGQFHYVILLDWFSSAEDLKLGTTLQSLKDALFKWESKTILQNEPLILEGGY
ENWLLCFPQYTTNARVTPPQHGRTEAVTVSLDFTYPSLEEPAPVPAVVAENEEIGDNLEE
RLKSLNRPNIQDAAVPKSDTSFVVNPVSVTRSIPEVDRSKKPSLKILGDNRAKSPSTVSD
SQSGENGRIVPDRSTKPMRDGRSTLTEEEKSRVHAETAALLEKNRREKELRERQQQEQKE
KLRREKEEQERKEKEQELKAKEEQKEKEHKEKLQQSKEDREQKERDERIKREQEEKEQER
THREVVEAKKQNKNESENISAKRIEIDKTSMDEREKGTRTPETQKRALGDASQTFVTVPG
KQTGVKGQPDSGAQKPGPLREDSEQDTEKLKSQREPLMRARSEEMGRIVPGLPAGWVKFL
DDITGTYRYYHSPTNTVQMYPPEMAPPATPPSTPPTRKAKPKVTVEREREHSKLKRSYSS
PDITQAVQEEDKKRIPLTPAVNRDNKPACYTKAEISRLSASQIRNLNPVFGGSGPALTGL
RNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEEFGVIMKALWA
GQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENND
HLDDSSAAEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAFMYLSLPLASS
SKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSSKKIEIWKLPPVLLVHLKRFSYDGR
WKQKLQTSVDFPLETLDLSQYVIGPKTSLKRYNLFSVSNHYGGLDGGHYTAYCKNASKQR
WFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAVDMAT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcctctgtacctaaggagctatacctctctacttcattgaaagatctc
aacaagaagacagaagtgaaacctgaaaagaccagtacaaaaagttatgtgcagagtgcc
cttaagattttcaaggcagcagaggaaagcagactggatagagatgaagaaaaagcttac
atcctgtatatgaaatatgtggctgtttataaccttattagaaagagacctgattttaag
cagcagcaggattattttcattcaattctgggacctacaaacttaaaaaaagctctcgat
gaagctgaaatactgtcagacagccttaaactcagatatgaggaagctgaagttcgaaag
aaacttgaggagagggacagacaagagctgcagaaaaagcaagaaccaaaagatgatgga
aagagctcagccaaaaactcctcagaaagtgctgtggattccaaaggaaaaagccaaagg
actaatggtgagacaaagcattcactggaaagaaaggatcagtctgatagcctgagtgga
gcagtcacacctgagaaactgtttgcaatgatgtcagacaaaaatattgaattacttata
atggatgctcgaagattgaaggattatcaggaatcctgtattcctaaatccatcagcgtc
ccagaagaagctatccgtcctggagatactgctaatctgattgaagctagactcccagag
gattctagagatgcatggaagaggagaggacagttccattatgttatactgctagactgg
tttagttctgctgaagacttaaagctgggaacaactcttcagagtctgaaagatgcactt
tttaagtgggaaagcaaaaccattctgcagaatgaacctttaattctagagggaggttat
gaaaactggctcctttgttttccccagtatacaacaaatgctagagtaactccaccccag
catggcaggactgaagcagtgactgtttctttggattttacatatccatctctggaagag
ccagctcctgtgccagctgtcgttgctgaaaatgaagaaatcggagataatttggaagag
cgactaaaatcacttaacagaccaaacatacaggatgctgctgttccaaaatctgacact
tccttcgtagttaatccagtgtcagttacaagaagtatccctgaggtggatcgttctaaa
aagccttcactaaaaatccttggtgataacagagcaaaatctccaagtacagtcagtgat
agccagtctggtgagaatggaagaatagttccagaccgctccacaaagcccatgcgtgat
ggaaggagcactctgacagaagaagaaaaaagtcgggtccatgcagaaactgctgctttg
ttagagaaaaacaggcgggagaaggaactgcgggagaggcaacaacaggaacagaaagag
aagctcaggagagagaaagaagaacaggaacgaaaagaaaaagaacaagaactaaaggca
aaagaggaacagaaggaaaaggagcacaaagaaaagctacagcaatcaaaagaggacaga
gagcagaaagagagggatgaacgaataaaaagagaacaagaggaaaaggaacaagaaaga
acacatagagaagtagtagaagcaaaaaagcaaaataaaaatgaatcagaaaacattagt
gcaaaaaggattgagattgataaaacatccatggatgaaagagaaaagggaactcgaaca
ccagaaacacagaaacgggcactgggtgatgcatctcagacctttgtgactgttccaggc
aagcaaacgggggttaaaggacaaccagacagtggagctcaaaagccaggacctcttaga
gaggattctgaacaagatactgaaaaacttaaatcccagcgggagccattaatgagagca
cgaagtgaggaaatgggaaggatagtcccagggctgcctgcaggttgggtaaagttcctg
gatgacatcactggaacctatcgttactatcactcgccaacaaacaccgttcagatgtac
ccaccagaaatggctcctccagccactcctccatcaacccctccaactcggaaagccaag
ccaaaggtgactgttgaacgggagagagaacactccaaactgaagcgctcctactcatcc
ccagatataacccaagccgttcaggaggaagacaagaaaagaattcctctaactcctgca
gtcaatcgtgacaataaacctgcctgttacactaaagcagaaatttccaggctctctgcg
tcacagattcggaatcttaatcctgtgtttgggggatcaggaccagctctgacaggactt
cgtaatctagggaacacttgctacatgaattccatattgcagtgtctgtgcaatgcacct
cacctggctgagtatttcaacagaaacttgtatcaagctgatattaacaggtcaaatttc
ctggggcataaaggtgaagtggctgaagaatttggtgtaataatgaaagctttatgggca
ggccagtataaatatatcagtccaaaggacttcaaaattacaattgggaagattaatgac
caatttgctggatatagccaacaggactcccaagaattgcttctctttctaatggatggc
ttgcatgaagacttaaataaagctgacaacaggaaaagatacaaggaagaaaataacgac
caccttgatgactcgagtgcagcagaaatagcctggcacaaacacaaacagctcaacgag
tccattattgtggcactcttccaaggccagttcaaatccaccgtgcagtgtctgacgtgt
cacaagaggtcccgaaccttcgaggctttcatgtatctctcgttaccactcgcatcctcc
agcaagtgcactctgcaggaatgccttagattattctccaaagaagaaaagctgactgat
aacaatagattttactgtagccattgcaaaactcgaagggattcttcaaaaaaaatagaa
atttggaaattaccacccgttcttcttgtgcacttgaaacgattttcctatgatggaaga
tggaaacaaaagcttcaaacttcagtagattttccactggaaactcttgacctctcacag
tacgttattggtccaaagacttccttgaagagatacaatctgttctcagtatcgaatcat
tacggtgggctggacggggggcactacacagcctactgcaaaaatgcttcaaaacagcgc
tggtttaagtttgatgaccatgaagtgtctgagatctcggcgtcctcggtgaagtcctca
gctgcttacattctcttttatacttcctatgaacagcgagcagtagatatggccacgtaa
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integrated database retrieval system
