Cinclus cinclus (white-throated dipper): 134049391
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Entry
134049391 CDS
T10813
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134049391 (MYO5C)
mRNA cycle factors
P-body specific factors
134049391 (MYO5C)
Membrane trafficking [BR:
ccic04131
]
Others
Actin-binding proteins
Myosins
134049391 (MYO5C)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134049391 (MYO5C)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134049391 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134049391
NCBI-ProteinID:
XP_062357791
LinkDB
All DBs
Position
13:9798396..9830588
Genome browser
AA seq
1740 aa
AA seq
DB search
MALAELYTRYNRVWIPDNEEVWQSAEITKNYKTGDRFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFDLLGLKEDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLGIFCE
LLDLSCDKVARWLCHRKIVTASETVTKPMTRAQAANARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILDLLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLVEILKESKFHLCANFFQDSPVSISPF
SSTINIKSARPVLKAPNKQLRMTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACILIQKRVRGWLQRRRFLSMR
RAALTVQQYFRGQRTVRQAITARNLKQTWAAIIIQKYCRGYLVRRLCQLIQVAAVTIQAY
TRGFLARKKYQKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTSLASAHMNDVDTIQKLESELEKLTAQKRMYEEKGKKYKEDNEKKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFSDIQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEIIIQDGLKMEVGQLKKQAQKIPELQKEIEL
LQTQKMDVEKQAQSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRFQEQTIKLKGKMEEMSNRLHYELERDRTQ
RRTTEAQNEVDIKEKESLMNTIQGIEGLRNGLMQDEVRDEVQSKIKQVTTRLAVENMDLE
EKLDMKDRIIKKLEDQIKTLTKTIEKAEAHAPTVPKEYIGMMEYKKEDEERIIQNLILDL
KPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLS
FWLSNTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSEYRQILSDLAIRIYHQFII
VMENNIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSVLQQLSYFYSTM
CQNGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNL
QSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKR
VSPSFVRKVQAMLNNREDIPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFRLGFLTRV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctgtacacgcggtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaaactggagaccgttttctccatgtg
cagttagaagatggaactgagctgagttaccctgttgatccagctgctttgccaccacta
cggaatcctgacatacttgttggtgaaaatgatctcactgcactcagttatctccacgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaagcttatctacacatat
agtggaataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatacagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtatactatgagatactttgctact
gtgagcaagtcaagcagcaatgcccatgtggaggataaagtactggcatccaatccaata
accgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtagatttggaaaa
tacactgaaatcagttttgatcagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcaattgtgtgcatctgctatgcaacctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacgcgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgacttactgggtctgaaggaggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagataaacatctcggtatattctgtgag
cttctggatttgagctgtgacaaagtggcgcggtggttgtgccaccggaagatcgtcaca
gcctcagagacggtgacaaagccaatgacaagggcccaggctgccaatgccagggatgct
ctggcaaagaagatctactctcatttatttgacttcattgtggaaagaattaaccaagcc
ctgcagttccctggcaaacaacacactttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaccttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctatataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattggttgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccatatcacctttc
agttctactataaacatcaaatctgccagacctgttctgaaagcacccaacaaacagctc
cggatgactgtgggcagtaagttccggaattctttgtctttgcttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaaactgccttttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttctggaaactattcgg
attagtgcacagagctacccttcaaggtggacttatattgagtttttcagccgctacagc
attcttatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagcggctgatccaggatcataaccaataccagtttggaagaacaaaaatttttttc
agagcaggacaggttgcttacttggagaagttgcgctcagacaagctgaggcacgcgtgc
atcctgatccagaagcgtgtgcggggctggctgcagaggaggaggttcctgagcatgagg
agagcagcgctcacagtgcagcaatacttccgtgggcagcgcacagtgaggcaagctata
actgcaagaaatctgaagcaaacatgggcagctataattattcagaaatactgtcggggt
tacctcgtccgtagactttgccagctcatccaagtggctgctgtaaccatacaagcttac
acaagaggatttctagcaagaaaaaagtatcagaagatgcgtgaggagcagaaggctgtg
gtcctccagaaatatgcccgtgcatggcttgccaggcgcagattccagaacattcggcgc
tttgtgttgaatatccagctttcttacagagttcagcaactgcagaaaaagatagaagaa
cagagtagagaaaatcatggtttgctggaaagattgaccagtctggcttcagctcatatg
aatgatgtggatacaattcagaaacttgaatcagaacttgaaaaattaactgctcaaaag
agaatgtatgaagagaaagggaaaaaatataaagaagacaatgagaagaaaattttaaaa
cttgagaatcagaataaagaattacaagaacagaaggaaaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcagtgac
atacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaaacag
gactatgaaaaggagattgaattgttgaagggagaaataaagattttgaaagaagaaaaa
actcagctacagcaacaaattcagcaagaaattatcattcaggatggcttgaaaatggaa
gtaggacagcttaaaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactt
cttcagacacaaaaaatggatgttgagaagcaggcccagtcacagaagcgagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttatgattttgaagatgtacga
agcagactctctacagaggatctggaacacttaaatgaggatggagaactgtggtttgcc
tatgagggcctgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaagttattccgagaggaaaatgacataaatgatggcattcggcttgaa
gttagcaggctaacttcagaaaatctggtaatcccagatctcaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgctttcaagagcagaccataaagttgaaa
ggaaaaatggaagagatgtcaaatcggctgcattatgagctagaacgggataggacacag
agacgaactactgaggcccagaatgaagtagacataaaagaaaaagagagtctgatgaac
acaatccaaggaattgaggggctgagaaatggtttgatgcaagatgaagtccgggatgaa
gtacaaagcaagataaagcaagtgacaactcgacttgctgtggaaaacatggatcttgaa
gaaaagcttgacatgaaagacagaataataaaaaaattagaagatcagatcaaaactctg
actaagactattgaaaaagctgaagcccatgcacccactgtgcccaaagagtacattgga
atgatggagtacaaaaaagaggatgaagaaaggatcatccaaaatctgatcctcgattta
aagccacgtggagttgtagttaatatgatccctggccttccagcccacatcctgttcatg
tgtgtgaggtatgcagattacctgaatgatgctgacatgctgaagtctttcatgaatgta
accattgatggcatcaaacaggttgttaaggaacattcagaagactttgagatgttgtcg
ttttggctttccaatacatattattttcttaactgtttgaagcagtacagcggggaagag
gaattcatgaagtataacactccacgtcagaataagaattgtttgaagcattttgacctc
tcagaatacagacaaattctcagtgatttggccattcgaatatatcaccaattcattatt
gtgatggagaacaacattcagcacatgattgtaccaggcatgctggaatatgaaagtctt
caaggaatttctggtttgaaacctacagggttccgtaaacgttcttctagcatagatgac
acagatacctacactatgacctctgtcctgcagcagctcagctatttttatagcactatg
tgtcaaaatggcttggactctgagctcctaaagcaggcagtgaagcagcttttctttctg
attggagctgtcaccctcaatagtctcttcctccgcaaggacatgtgctcctgtagaaaa
ggaatgcagataagatgtaatatcagctacttggaagaatggctaaaggacaagaatctt
caaagcagcaatgccaaagaaactttggagcctctgtctcaagcagcctggctccttcag
gttaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgcacatctctttct
actgtgcagatagttaagatcctgaactcatacactccgatagatgactttgagaaaaga
gtgagtccatcatttgttcggaaagtccaggctatgctgaacaaccgtgaggacattcca
cagctcatgcttgataccaaacatctctttcaagtgacatttcctttcaccccctctcca
catgctttggaactgatacaagtccccagcagcttcagacttggctttctcacgagggtt
taa
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