Cinclus cinclus (white-throated dipper): 134049440
Help
Entry
134049440 CDS
T10813
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04810
Regulation of actin cytoskeleton
ccic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134049440 (CYFIP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134049440 (CYFIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134049440 (CYFIP2)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134049440 (CYFIP2)
Factors involved in mRNA localization
Other mRNA localization factors
134049440 (CYFIP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
134049440
NCBI-ProteinID:
XP_062357865
LinkDB
All DBs
Position
14:16838562..16878692
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEEFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtcacgcttgaggatgccttgtccaacgtggacttgctggaggagctg
cccctgccagaccagcagccatgcattgaacctcctccctcctccatcatgtaccaggct
aattttgacacaaactttgaagacaggaatgcctttgtgacaggcattgccaggtacatc
gagcaggccacggtgcactccagcatgaatgagatgctggaagaaggccacgagtatgct
gtgatgctctacacgtggaggagctgctcacgagccatccctcaggtaaaatgtaacgaa
cagccaaaccgagtggagatttatgagaaaacagtggaagtcctggagccagaagtcacc
aagcttatgaagttcatgtattttcagcgcaaggccatcgagcggttctgcagtgaggtc
aagcgcctgtgccacgctgagaggaggaaggacttcgtgtctgaggcctatctcctcact
ctgggcaaattcatcaacatgttcgctgtcctggatgagctgaagaacatgaagtgcagc
gtcaaaaatgatcattctgcttacaaaagagctgcgcagttcctgcggaagatggcagac
ccccagtccatccaggagtcccagaacctctccatgttcctggcaaaccacaaccgcatc
actcagtgtctgcaccaacaactagaggttatccctggctatgaggagttgctggctgat
attgtcaacatctgtgtggattactatgaaaataagatgtatctcacccccagtgagaag
cacatgctcttaaaggtgatgggatttggcctgtatctcatggatgggaatgtcagcaac
atttacaagttggatgccaagaagagaatcaaccttagcaaaatagacaaattcttcaag
cagctgcaggtggttcctttattcggcgatatgcagatagaactggccagatacattaag
accagtgctcactatgaggagaacaaatccaagtggacgtgcactcagagcagcatcagc
ccccagtacaacatctgtgagcagatggtgcagatccgggacgaccacatccgcttcatc
tcggagctggcgcgctacagcaacagcgaggtggtcactggctcaggcctggacagccag
aagtcagatgaggagtacagggagctctttgacctggctttacggggactgcagctgctc
tccaagtggagtgcccacgtcatggaagtgtactcttggaagctggttcatcccacagat
aagttctgtaacaaggattgcccaggaacagccgaggagtatgagagagccacccggtac
aactacaccagtgaggagaagtttgcctttgtggaagtgattgccatgatcaaaggcctg
caagtgctgatggggaggatggagagtgtcttcaaccaggccatccgcaacaccatctac
gcagccctgcaggactttgcccaggtcaccctgagggagcctctccgacaggctgtcagg
aagaagaagaatgttctgatcagtgtccttcaggcaattcggaagacaatctgtgactgg
gagggaggtcgagagcctccaaatgatccttgcctgaggggtgagaaggatcccaaaggt
ggatttgatattaaagtcccacgacgagctgtgggaccatcgagcacacagctttacatg
gtgcggaccatgctggagtccctcatagcagacaagagtggctcaaagaagacactgagg
agcagcttggatgggccaatagtcttggccattgaggagtttcacaagcaatccttcttc
ttcacccaccttctcaacatcagtgaagctctgcagcagtgctgtgacctgtcccagctc
tggttcagggagttcttcttggagctgaccatgggccgccgcatccagttccccatcgag
atgtccatgccctggatcctcacagaccatattttggaaaccaaagaaccctccatgatg
gagtatgtgctgtaccccctggatctctacaatgacagtgcatactatgctttgacaaag
ttcaaaaagcagttcttgtatgatgaaattgaagctgaagtgaatttgtgctttgatcag
tttgtgtacaagctggcagatcagatctttgcctattacaaagcaatggctggcagtgtt
ttactggacaaacgtttccgggctgagtgcaagaattacggggtgatcattccataccca
ccatccaaccgctacgaaacgctgctcaagcagaggcacgtccagctgctgggcagatca
atcgacctgaacaggctcattacccagcgcatctctgcagccatgtacaaatcattagac
caggccatcagccgctttgagagcgaggacctgacatccatcgtggagctggagtggctc
ttggaaatcaaccgcctgactcacaggctgctgtgcaagcacatgactctggacagcttc
gatgccatgttccgcgaggccaaccacaacgtgtccgcgccctatgggcgcatcaccctg
cacgtcttctgggagctcaacttcgacttcctgcccaactactgctacaacgggtccacc
aacaggtttgtgaggacagcgatccccttcacacaggaaccccaacgggacaagccagcc
aacgtccagccctattacctctacgggtccaagcccctcaacattgcctacagccacatc
tacagctcctaccgcaacttcgtggggccacctcacttcaaaaccatctgtcggctcctg
ggctaccaaggcattgctgtggtcatggaagagctgctgaagatcgtcaagagcctgctc
caaggcaccatcctgcagtatgtgaagactctgattgaagtaatgcccaagatctgccgc
ttgccaagacatgaatatggctctccaggaatcctggagtttttccaccatcagctgaag
gacatcattgagtatgcagagctgaagacagacgtgttccagagcctcagagaagtgggc
aatgccattctcttctgcctccttatcgagcaggctttgtcccaggaagaagtttgtgat
ttgctgcatgctgctcccttccaaaatattttgcccagggtctacatcaaagaaggagaa
cgcttggaggtgcgcatgaagcgtctcgaagccaagtatgccccacttcacctggttccc
ctaatagagaggctgggcactccgcagcaaatagccatcgcccgggagggggacctgctg
accaaggagcggctgtgctgcgggctctccatgttcgaggtgatcctgacgcgcatccgg
agctacctgcaggaccccatctggcgtgggccgccccccaccaacggcgtcatgcacgtg
gacgagtgcgtggagttccaccggctctggagcgccatgcagttcgtgtactgcatcccc
gtgggcaccaacgagttcacagcagagcagtgctttggagatggtctgaactgggcaggt
tgctctatcattgttctccttggacagcaacgacgctttgacctctttgacttctgctac
cacttgctgaaggtgcagaggcaggatggaaaggatgaaatcataaaaaacgtgcccttg
aagaagatggccgacaggatcaggaagtaccagatcctgaacaacgagatctttgccatc
ctgaacaagtacatgaagtcggtggaaacagacagttccacggtggagcacgtgcgctgc
ttccagccccccatccaccagtcgctggccaccacctgctag
DBGET
integrated database retrieval system
