KEGG   Cinclus cinclus (white-throated dipper): 134049573
Entry
134049573         CDS       T10813                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
ccic  Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccic03019]
    134049573 (GEMIN5)
   03041 Spliceosome [BR:ccic03041]
    134049573 (GEMIN5)
Messenger RNA biogenesis [BR:ccic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     134049573 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     134049573 (GEMIN5)
Spliceosome [BR:ccic03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    134049573 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_IFT122_1st NBCH_WD40 WD_LRWD1 TPR_IF140-IFT172 Tricorn_2nd Lgl_C
Other DBs
NCBI-GeneID: 134049573
NCBI-ProteinID: XP_062358089
LinkDB
Position
14:complement(16192368..16209276)
AA seq 1524 aa
METETGTGMGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAAAPTFYGELIG
HTDRISGFAFCHCPGQSSLCASSSDDGSVRIWDSGTLSPVLEYSLHQNAISALHWSPLVK
DLIVSGDEKGVIVCYWYNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVIIDIS
RKREVVHRLRGHEDEIHCLAWCPVPGEERLPAWQDEFQAPPEEGKVQNGELTHDTATKKG
CYLASGSKDQTIRIWSCTRGRSVMTLKLPPTKRRGAAVDPAVKERIWLTVHWPAGHPTDI
VSSAFGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDRELLFSISMDRDV
KCWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSVNNIYDVKTF
WQSIKSKVTALSWHPTKEGFLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTLA
WGPPTPPLISGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLP
ARTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPELS
YLIASGSINATIYVHNLKNVVENSSENPLMITEPFRTLAGHTAKITSLSWSPHHEGRLVS
ACYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQEH
TRPPQGKKSIELEKKRSIQPKVKAKKKKKPVGKSPGKQDGNDAMNGDDNMKEVLLEENGV
SDHEGEKEAQEAELADKVSVTVSRDTSSSACDYSSFTLPKPSVTQKIAPVKRDPPKEKPI
PDASLKKRKPRSILPFSTLMDHRSKEELHQDCLRLAACLKTKDNNEGVSPDLKDCIHLGL
FTDRDSLHKMIDMEGKHHLENGHAELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPM
VGYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVMAKARL
RPEDPILKDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKTAAELA
LISGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCRCLSERN
PCERKSPVPPCYHSWELNREASFLDMVTEVWQNVLGMDTTEKATCAQEQLCRIEHPPSTS
NTHPKQVLFHISHDLALAALNCHLGTWDEAVKSILGAVTRSFDAGNFTLMQEICSIILPK
GCDDLREKLDSTNSQSMDACRSLEGFVAYRLLYDLWWNPPKDSLGLQKAVLGPVLCPSEQ
TALEETVQTAAEISENLCSTTQVPNCDTRSDSRTDSVDVVDRQSKLKGCQVLLSEEMAAL
QNTQRDIAEVQETLAEMIHQHQQQRNNLQENTDGKTQGSNLEQSSETESDKPCSDSNQMN
CKDEAKQPITLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHLGSQCPPELQE
EALALLRKHGDAGVHKKAGRSFLT
NT seq 4575 nt   +upstreamnt  +downstreamnt
atggagacggagacgggaacggggatgggagtgcgggcgctgcccgcctcccccaactgg
tacagcagccgctgcagcgatgccagcagtgacggccgcctcttcggcttcgcggcgagg
caccgcgtttgcctgctggatgtcgccgccgcgcccacgttttacggggagctcatcggg
cacacggacaggatctccggcttcgccttttgccactgccccgggcagagcagcctctgc
gccagcagctcggacgatgggagcgtcagaatctgggacagcgggacgctgtcgccggtg
ctggagtacagcttgcaccagaacgcaatctcagcgctgcactggtcacctcttgtgaaa
gatctgattgtgtctggtgatgagaaaggtgtcattgtttgttactggtacaacagaagt
gacagccagcagttcttcccagagccccggacagttttctgcctcacctgttctcctcat
catgaaaacctggtggccattggctacaaggatggcatggtggtgataattgatatcagc
aggaagagagaagttgtgcaccggctgagaggccatgaggatgaaatccattgtctggcc
tggtgccctgtgcctggggaagaaaggttacctgcttggcaggacgagttccaggctcct
ccagaagaaggcaaggttcaaaatggggagctaacacacgacacagccacgaagaaaggt
tgttacctggcctctggaagcaaggatcaaaccatacgaatatggagctgtaccagaggc
aggagtgtgatgactctgaagctgccacccaccaagagaagaggtgcagccgtggatcca
gcggtcaaggagcgcatctggctgactgtgcactggcctgctggccatcccactgacatt
gtgtccagtgcctttggaggagaactgctcctttggaatttgacccagcctggcaaacgc
aagtggacacttctgggatcttcagaaggacaaaaccactcacgaatcgtgttcaatctc
agttctgtgaaacaccaagacagagagctccttttttccatttcaatggacagagatgtg
aaatgctgggatctgtcaactctggattgcagctggaccatgccctcccttggaggattt
gtctacagccttgccttctcccctgtggacacaggctgccttgccatcggggttggggac
agcatgatccgagtgtggaacactttgtctgtgaacaacatttatgatgttaaaaccttc
tggcaaagcataaagtccaaggttacagcattatcctggcatccaactaaggaagggttc
ttggcttttggaacagatgatggaaaagttggcatatttgacaccttgtccagcagtgct
aagaataagccacctcagatctccagcacttaccacaagaagacagtgtacacattagcc
tggggtcctccaacccctcctctgatttctggagaagaaagtgaacaaccttctgtaact
ttatatagttgtgctggagaaggaattgtttttcaacacaatccctggaagcttaatgga
gaagcaaacgacatcaacaaagtcatcagagacaccaattcaatcaaacacaagctgcct
gcacgtacagagatcagctggaaaccagatggcaaactcctggctcttggcaatgaggat
ggctcaattgaaatatttcaggcaccaaacttgaagttgctctgcactatccagcagcat
cacaaactgatcaatgccattcgctggcaccatgagcacgggacccagccagagctgagt
tacttgatagcctcaggctccatcaatgccaccatttatgtgcataatctgaagaacgtt
gtagagaactcttcagaaaatcctttgatgataacagagcctttccgaactctggctggg
cacacagctaaaatcacaagtctttcttggagcccccaccacgaggggagattggtgtct
gcttgctatgatggcactgcacaggtgtgggatgtgatgaaggaagagccactctgcaac
taccgagggcaccagggccgcctgctgagtgtccagtggtcaccagtagattcagattgt
gtttatacaggagcagatgatttttctgttcacaaatggcacatctccaagcaggagcac
acacggcctcctcagggcaaaaagagtatagaattagagaagaaaagaagtatccagcca
aaagtcaaagccaagaagaagaaaaagcctgtaggcaagagtccaggcaagcaggatgga
aatgatgccatgaatggagatgacaacatgaaagaagtgctgctggaggaaaatggagtg
tcagaccatgaaggagaaaaagaagctcaggaggcagagttggctgataaagtctctgtg
actgtgtccagggatacatcttcatctgcatgtgattattcttcattcaccttgccaaag
ccttctgtgacccagaaaattgctcctgtgaaaagggatccacctaaagagaaaccaatt
cctgatgcctctctgaagaagaggaaacctcgttctattctgcccttcagcacattaatg
gatcacagatcaaaagaagaattgcatcaggattgcttgaggctggctgcatgtctgaaa
actaaagataataatgaaggtgtgtcccctgacctcaaggattgcatccacctggggctt
ttcacagacagggattctctgcacaagatgattgatatggaaggaaaacaccacttggag
aatgggcacgcagagctcttccagcagctcatgctgtggaaaggagacatgaagggtgtc
ctccaggcagctgctgagaggggggagctgacagaccagctcgtagccatgtcacccatg
gttggctaccaggcctgggtttggacagtggaagcctttgccaagcagctgtgttttcag
gagcaatatgtgaaggctgcttcccatctcctgtccatccataaagtctatgaggctatc
gagctcctgaaagtgaacaacttttacagggaagcaattgtaatggctaaggccaggctg
cgcccggaagacccaattctgaaggatctctacaccagctgggcagctctgctagagaaa
gatggtcattattccatggctgccaaatgttatttgggggcttcctcaccctatgatgca
gttaaagtgttgtcaaaaaagggggatgtgacatctcttaaaactgctgctgagcttgct
ctgatatctggggaagaggagttgtcagcaactttgtctttgagatgtgcccaagacctg
ctgttgtccaggaactgggtgggagctcaggaagtccttcagcagcataaaactttattt
ggacaaagacttgttttctgcctgaatgaactgctctgcaggtgcctgagtgaaaggaat
ccctgtgagcgaaagagccccgtgcccccctgttaccacagctgggagctgaacagagag
gcctcatttcttgacatggtgacagaagtgtggcagaatgtgctgggcatggacaccact
gaaaaagccacgtgtgcacaggagcagctttgcaggattgagcatcctccttcaaccagc
aacacacacccgaagcaggtgcttttccatatctcccatgacctggcccttgcagccctg
aactgtcacttgggtacatgggatgaggcagtgaaaagtattcttggagctgtgacccgc
agttttgatgctgggaatttcactctgatgcaggagatttgcagcatcatccttcctaag
ggctgtgatgacctaagagagaaactggacagcacaaactctcagagcatggatgcctgc
aggagtctggagggctttgtggcttacagactgctttatgacctgtggtggaacccaccc
aaagactcccttggcctgcagaaggctgtgttgggtcctgtgctgtgtcccagtgagcag
acagctcttgaggaaacagttcaaactgcagctgagatcagtgaaaacctctgcagtaca
actcaagttcccaactgtgacacacggagtgactcaagaactgactctgttgatgtggta
gacagacagtcaaaactgaagggttgccaggtgctcctttcagaagagatggctgccttg
cagaacacccagagagacatagctgaggtccaggagactttagcagaaatgatccaccag
catcagcaacagaggaacaatctccaggaaaacacagatggaaaaacccagggaagcaac
ctggaacagagttcagagactgaatcagacaaaccatgctctgacagcaaccagatgaat
tgcaaagatgaagcaaagcaaccgattacactccctgaactcacaaagcagcttctgaaa
gcaaagcagaaattagctgagttcccagacaatttaaaggtcttcccattccctgacgtg
ctggagtgctgccttgtgctccttcaccttggatcccagtgtcctcctgagctgcaggaa
gaggctctggctctccttaggaaacatggtgatgctggtgttcacaaaaaggctggcagg
agcttcttgacctga

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