Cinclus cinclus (white-throated dipper): 134049653
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Entry
134049653 CDS
T10813
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134049653 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134049653 (RBM22)
Spliceosome [BR:
ccic03041
]
Complex B
Other components
Prp19-related factors
134049653 (RBM22)
Complex C
134049653 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
134049653
NCBI-ProteinID:
XP_062358212
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Position
14:complement(14983825..14991016)
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AA seq
420 aa
AA seq
DB search
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHTMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctgggctccaacacctacaaccggcagaactgggaggatgcggacttc
cctatcctgtgccagacatgtcttggagaaaatccctatattcggatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggccgttcacggtgttccgctggtgccctggc
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaacgtc
tgtcagacctgcctgctcgacctggaatacggtttacctatccaagtccgggatgcagga
ctctcacttaaggatgaaatgcctaaatctgatgtcaataaagaatactacacccagaac
atggagcgggagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccatactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaacctacagatccagatgatcctctggctgaccagaacatcaaagat
cgttactatggaatcaatgatcctgtggctgacaaacttctgaaacgagcatcaacaatg
cctcgtctagatcctcctgaagacaagactattactacgctgtatgttggagggcttgga
gataccatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggaca
ataacagtggtgcagaggcagcaatgtgctttcatccagtttgccaccagacaggctgca
gaggtggctgctgagaaatccttcaacaaactcattgtcaacggccgcagactcaatgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaagaaggcacgacagaa
tcagggataaagctggagccagttccaggacttcctggagccctcccccctcctcccgct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggcccttcagctgtg
gtgaatattgccctgccacctcctcctggcattgctccaccaccacctccaggtttcgga
ccacacatgttccacaccatggggcccccacctccgttcatgagagccccaggccccatc
cactacccatcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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