Cinclus cinclus (white-throated dipper): 134049939
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Entry
134049939 CDS
T10813
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134049939 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134049939 (CSTF2)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134049939 (CSTF2)
U7-dependent histone pre-mRNA processing factors
134049939 (CSTF2)
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Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
134049939
NCBI-ProteinID:
XP_062358691
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All DBs
Position
15:18805729..18813207
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AA seq
606 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPSNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
GERGGMKYWVVRIVQARNQNPRGLEPRGLEPRGLEPRVMEARGLEPRVLEPRVLEARAME
ARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGTGIQGGGIPG
AGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQ
KSTGAP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcgttccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggaacagctgaaggacattttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacggggaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgt
gagttcagcggcagggccctgcgtgtcgacaacgctgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctatggggaccctgtcaac
ccagaggatgcccccgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccacagctggcttatgcactgctgcaggcccaggtggtcatgagg
attgtggacccagagatcgcgctgaaaatcttgcatcgccagaccagtgttcctcctctg
atcccaagcaaccagcagccagtgccagggccagggcctgggccaggaccggggcctggg
ccagggcccaatgcacagctgaacccgcagaacaccccatcgtcccagccacagcccata
ggcgggatgcatgtcaacggtgctcctcctctgatgcagccacccatgcaggggggagta
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggtcccatggctcca
ggaggtgggatgcagccacaggttgggatgccaggtgcagggcccgtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
ggtgagagagggggcatgaaatactgggtggttcggattgtgcaggcaagaaatcagaat
ccccgagggctggagccacgagggctggagccacgagggctggagccccgggtgatggag
gcgcgaggcctggagccacgggtcctggagccacgagtgctggaagccagggccatggag
gccaggggcctggagccccggggcctggagcctcgagggcctggtcccaacccacgtggc
ccaatgcctggtgggatacagggtcctgggccacttaacatgggagccagtggcccgcag
gggccccgccaggttcctaacatggctgggacaggcatccagggaggaggcattcctggg
gcaggagtccaaggagctggtcagcctggaggctttagcccgggacagagccaggtcacc
ccccaggatcacgagaaggcagcactgatcatgcaggtcctgcagctgacagcagaccag
attgccatgctgcccccagaacagcggcagagcatcctcattctgaaggagcaaatccag
aaatccacgggggcaccctga
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